Gene Csal_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1420 
Symbol 
ID4027972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1606945 
End bp1607814 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content65% 
IMG OID637966604 
Productinner-membrane translocator 
Protein accessionYP_573473 
Protein GI92113545 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATA TCCTGCAACT TCTCATCTAC GGCCTGGTCT TGGGCAGCGT CCTGACCATG 
GGCGCGATCG GCGTGTCGAT GATCTTCGGC ATCCTGCGCT TCGCGCACTT CGCGCATGGC
GACTTCATGA CCCTGGGGGC CTACCTTGGC CTGTCCTTCA TCTCGGCCTT CGGCCTGAGT
TCGTGGTGGG CGCTGCCCGC GGCGATGGTC GGCATGGCGG TGATCGCGGT GTTCATCGAC
CAGGTACTCT ACCGACGCAT TCGCCGCACC CAGCCGGTGA TCCTGCTGAT CGCCTCGTTC
GGCATGGCAC TGATCCTGCG CAGCCTGGTG CAGCTGATCT GGGGGTCCGA CAACCAGACG
TACACCTCGG GCATCCAGTT TCCTTGGCGG CTCGACTGGC TGGGCGGAAT GCGGCTCAAG
CCCGATCATC TATGGATCAT GCTGATCTCG CTGGGTCTGG TCGCCGGCGT GCATCTGTTC
CTGACGCGCA CCCGGCTGGG CAAGGCGATG CGTGCCATGT CCGACAACAT GGACCTGGCG
CTGGTCTCGG GGATTCCCGC CGAGCGCGTG ATCATGGTCA CCTGGGTGAT CGGCGGTGCG
CTGGCAGGCG CGGCCGGCGT GTTCCTGGGC ATCGACACGC GCCTGCATCC GGTGATGGGC
TGGACCGCGC TGCTGCCGGT GTTCGCGGCG GCGATTCTCG GCGGCATCGG CCGACCCTAC
GGCGCCATTG CCGGCGGCAT GATCATCGGC GTGTCGATGG AGATGTCGAC GCTGCTGATT
CCTGCCGCCT ACAAACCCGC CGTGGCCTTC GCGATCATGG TCGGCATGCT CATCCTGCGT
CCGCAGGGCA TCTTCAAGGG GACTGTGTGA
 
Protein sequence
MTDILQLLIY GLVLGSVLTM GAIGVSMIFG ILRFAHFAHG DFMTLGAYLG LSFISAFGLS 
SWWALPAAMV GMAVIAVFID QVLYRRIRRT QPVILLIASF GMALILRSLV QLIWGSDNQT
YTSGIQFPWR LDWLGGMRLK PDHLWIMLIS LGLVAGVHLF LTRTRLGKAM RAMSDNMDLA
LVSGIPAERV IMVTWVIGGA LAGAAGVFLG IDTRLHPVMG WTALLPVFAA AILGGIGRPY
GAIAGGMIIG VSMEMSTLLI PAAYKPAVAF AIMVGMLILR PQGIFKGTV