| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1400 |
|---|
| Symbol | |
|---|
| ID | 4029064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 1588487 |
|---|
| End bp | 1589557 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637966585 |
|---|
| Product | Phage portal protein, PBSX |
|---|
| Protein accession | YP_573454 |
|---|
| Protein GI | 92113526 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5518] Bacteriophage capsid portal protein |
|---|
| TIGRFAM ID | [TIGR01540] phage portal protein, PBSX family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.691586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGG CCGACAAACC CCGCATGCGT GTGCCGGCGA CCCTGTCCGA GTCCGAACCG
GCGGCGGAGG CGTCGCCAGC CCCGGCGCGG GCCGAGGCGT TCACCTTCGG CGAGCCGGTA
CCGGTGACGG ACCTGGCCGA TTTCCTCTAC ACCGGCTGTT GGATGCTGAC GGCGCGCTGG
TACGAACCGC CGGTGGATCT GCCAGCGCTG GCCAAGGTGT ATCGCGCGAC GGCACATCAC
GGTTCCAGTT TGCAGGTGAA GCGCAACATT CTATCGCGAT CGTTCATTCC GCATCGCCTA
CTGAGCCGGC AGGCGTTCCG TGCCCTGGTC ACGGATTACC TGGTGTTTGG CAATGCGTAC
ATCGAGCGGG TGTATGGGCG CCTTGGGCGG CTGCTGGCAT TGCGGCCGGC GCGAGCCAAG
TACGTGCGCC GAGGCGTCGA AGAAGGGCAG TACTGGTGGG TGACATCCTG GCAGGTGGCC
AGCGAATTCG AGCGCGATTC GGTGATCCAC CTGATGGAGC CTGACATCAA CCAAGAGATC
TACGGCGTGC CGGACTACCT CGGCGCGCTG CAGTCGATCC TACTCAACGA AAACGCTACC
TTGTTCCGCC GCAAGTACTA CCTGAACGGT AGTCATGCCG GCTTTGTGAT GTACGTCTCC
GATACCGCGC AGAACCAGGA AGACATCGAT GCCATGCGCG AGGCCCTGCG CAACTCCAAG
GGCGTGGGCA ACTTCCGCAA CCTGTTCCTT CACTCGCCGG GCGGCAAGAA GGATGGCGTA
CAGATCATCC CCATCAGCGA GGTCGCCGCC AAGGACGAAT TCGCCGGCAT CAAGCAGGAA
ACCCGCGACG ACACCCTCGC CAGCCACCGC GTACCGCCCC AGCTGATGGG CGTGATGCCC
AACAATGTCG GAGGATTCGG CGACGTGGAG AAGGCGGCCA GGGTCTTCGT CACCAACGAG
CTCGAGCCGC TGCAAGCCGT CTTCGAAGAG GTCAACGACC TGGTGGGGGA GCAGGTGATC
CGGTTTCGGC CTTACACACT TGAGGCGGCC AGCGAATCGC CAACCGGATA A
|
|---|
| Protein sequence | MTTADKPRMR VPATLSESEP AAEASPAPAR AEAFTFGEPV PVTDLADFLY TGCWMLTARW
YEPPVDLPAL AKVYRATAHH GSSLQVKRNI LSRSFIPHRL LSRQAFRALV TDYLVFGNAY
IERVYGRLGR LLALRPARAK YVRRGVEEGQ YWWVTSWQVA SEFERDSVIH LMEPDINQEI
YGVPDYLGAL QSILLNENAT LFRRKYYLNG SHAGFVMYVS DTAQNQEDID AMREALRNSK
GVGNFRNLFL HSPGGKKDGV QIIPISEVAA KDEFAGIKQE TRDDTLASHR VPPQLMGVMP
NNVGGFGDVE KAARVFVTNE LEPLQAVFEE VNDLVGEQVI RFRPYTLEAA SESPTG
|
|---|
| |