| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1392 |
|---|
| Symbol | |
|---|
| ID | 4029056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 1582556 |
|---|
| End bp | 1583029 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637966577 |
|---|
| Product | glycoside hydrolase family protein |
|---|
| Protein accession | YP_573446 |
|---|
| Protein GI | 92113518 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.9576 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTTA AACGCCGCCT CATCGTCGGC GGGACCGCCG GCGCGCTCAG CCTCGCCACC
GCCGTCGTCT CACAGTTCGA AGGGTATCGG TCGGAGGCCT ACCGAGACCC CGTAGGCATT
CCGACCATCT GTTATGGCCA CACCGGCGAT GTCGATATGG GCCAGACACT GAGCCAATCC
GAGTGCAAGG AATTGCTCGC TGAGGATCTC GGCACGGCCT TCGACGCCGT CGACCAGCGC
GTCGAAGTCG AGCTGCCCCC GGCGCGTCGC GCGGCCTTGG CCTCGTTCGT CTACAACGTC
GGCGAAGGTA AATTCGCCCG CTCGACTCTG CTGAAGCGAC TGAACGCCGG CAAAGTGCGC
GCCGCCTGCG ACGAGCTCAA CCGCTGGGTC TACGCCGGGG GCCGTAAGCT CGCAGGCTTG
GTCAAGCGCC GCGCCGCTGA ACGCAAGCTG TGCCTGCGGG GGCTCGATCC GTGA
|
|---|
| Protein sequence | MSLKRRLIVG GTAGALSLAT AVVSQFEGYR SEAYRDPVGI PTICYGHTGD VDMGQTLSQS
ECKELLAEDL GTAFDAVDQR VEVELPPARR AALASFVYNV GEGKFARSTL LKRLNAGKVR
AACDELNRWV YAGGRKLAGL VKRRAAERKL CLRGLDP
|
|---|
| |