| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1352 |
|---|
| Symbol | |
|---|
| ID | 4029141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 1550482 |
|---|
| End bp | 1551255 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637966536 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_573406 |
|---|
| Protein GI | 92113478 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000725132 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCT GGCAGACCTG GATCGCGCTT TGGACCCTGG TGACCAAGGA AGTGCGCCGC
TACATGCGCA TCTGGCCGCA GACGCTGCTG CCGCCTTCGA TCACCATGAC CATGTACTTC
ATCATCTTCG GCAACCTGAT CGGCTCGCGC ATCGGGCCTA TGGACGATAT CCCCTACATC
GATTACATCG TGCCCGGTCT GATCATGATG GCGGTGATCA CCAACAGCTA CTCCAACGTG
GCCTCGAGCT TCTTCTCCAA CAAGTTCCAG CGCAGCGTCG AGGAGATGAT GGTCTCGCCG
ATGCCCAACT GGGTGATTCT CGCCGGTTTC GTGATCGGCG GTGCATCGCG CGGCCTGGCC
GTGGGCTTGA TCGTCACCGT GGTCTCGATG TTCTTCACCG ACCTCTCGAT TCACCATCCT
TGGGTGACCA TCGGGGTGGT GATCATGACG GCGTTGCTGT TTTCCATCGG CGGGTTCATC
AATGCCCTGG TGGCACACAA GTTCGACGAC ATCTCGATCG TGCCGATCTT CGTGCTGACG
CCGCTCACCT ATCTGGGCGG GGTGTTCTAC TCGATCAACA TGCTGCCGGA CTTCTGGCAG
GGCGTGTCGA TGGTCAATCC CATTCTGTAC ATGGTCAACG CCTTCCGCTA CGGCATTCTC
GGGGTCTCGG ACATCCCGGT CGGCGGAGCG CTGGTGGCCA TCGCGATCTT CATCGTCGTG
TTCTTCGCGG TGGGGCTGTG GATGCTCGAC CGCGGCAAGG GGATCCGGAG CTGA
|
|---|
| Protein sequence | MNAWQTWIAL WTLVTKEVRR YMRIWPQTLL PPSITMTMYF IIFGNLIGSR IGPMDDIPYI
DYIVPGLIMM AVITNSYSNV ASSFFSNKFQ RSVEEMMVSP MPNWVILAGF VIGGASRGLA
VGLIVTVVSM FFTDLSIHHP WVTIGVVIMT ALLFSIGGFI NALVAHKFDD ISIVPIFVLT
PLTYLGGVFY SINMLPDFWQ GVSMVNPILY MVNAFRYGIL GVSDIPVGGA LVAIAIFIVV
FFAVGLWMLD RGKGIRS
|
|---|
| |