Gene Csal_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1338 
Symbol 
ID4027733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1530476 
End bp1531279 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content73% 
IMG OID637966517 
Productglutamate racemase 
Protein accessionYP_573392 
Protein GI92113464 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.537109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCGC CGATCCTGAT CTTCGACTCC GGCGTCGGCG GGCTGTCGGT GGTGGGGGCC 
TTGCGGGCGC GCCTGCCCGG CGCGGCGCTG GCCTATGTCT GCGACAATGC GGCCTTGCCG
TACGGGACCA AGCCCGATGC CTGGCTGGTC GCGCGCATCG TGGCGGCGTG CCGCGCGGCG
GTGGCGGCCA GCGGCGCGTG CGCGCTGGTG GTGGCCTGCA ACACGGCCAG CACCTTGGCG
CTACAGGCGC TGCGCGAGAG CCTGACGGTC CCGGTGATCG GCACCGTGCC GGCGATCAAG
CCTGCCGCCC AGCTCTTGCG CAGTGGCGTG TTCGGGTTGC TGGCGACCTC GGCGACGGTA
TCGCGTCCTT ATACGCAGCG CCTGATCGGC GAGTTCGCCA CGCATTGCAC GGTCATCCGG
CTGGCCGCCG ATCCGCTGGT GGCGCAGGCC GAGCGGGTGC TGGCCGGTCG TGCGCCCGAC
GAGGCGGTCA TCGCCGCGAG CCTGGCGCCC TTATGGGAAG CGCCGGACCT CGATACCGTG
GTGCTTGGGT GCACGCATTT CCCGCTGCTG CGCGAGACGC TGGCGGCCCA GGCACCGCGT
GACGTGCGCT GGATAGACTC CGGCGACGCC ATCGCGCGGC GTGTGGCGCA GGTGGTGACG
CCCGCTCCGT GCAACATGCC CGGCGCGGGC GAGAGCTGGG CCAGTGCGCC GCACCGGCCG
GGGCTGGCGC GGGCCCTGGC GGAATACGGT TTCAGCGCGC CGCGCGCCCT GTCGCTGCCC
GACGTTTTCT CGGACAGAGC TTGA
 
Protein sequence
MTAPILIFDS GVGGLSVVGA LRARLPGAAL AYVCDNAALP YGTKPDAWLV ARIVAACRAA 
VAASGACALV VACNTASTLA LQALRESLTV PVIGTVPAIK PAAQLLRSGV FGLLATSATV
SRPYTQRLIG EFATHCTVIR LAADPLVAQA ERVLAGRAPD EAVIAASLAP LWEAPDLDTV
VLGCTHFPLL RETLAAQAPR DVRWIDSGDA IARRVAQVVT PAPCNMPGAG ESWASAPHRP
GLARALAEYG FSAPRALSLP DVFSDRA