Gene Csal_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1312 
Symbol 
ID4027766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand+ 
Start bp1495178 
End bp1495861 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content65% 
IMG OID637966491 
ProductThiJ/PfpI 
Protein accessionYP_573366 
Protein GI92113438 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTT TGATGGTACT CACGTCGCAC GACCGCATGG GCGATACCGG CAATCCCACC 
GGTTTCTGGC TGGAAGAGTT CGTGGCGCCG TATTACGTGT TCAAGGATGC AGGGGCCGAC 
GTGACCCTGG CCTCGCCGAA GGGCGGGCAG CCCCCCGTCG ATCCCACGTC CACGCAGCCC 
GATGCGCTGA CCGAGGAGAC CCGCCGCTTC GACGGTGACG ACGAGGCCAA GGCGCAGTTG 
GCCAATACGC ACCCGCTCGA CACCATGCGT GCCGACGACT TCGATGCGGT CTTCTACCCC 
GGTGGCCACG GGCCGCTCTG GGACTTGACC GAGGATCGTC ATTCTCAGCA GTTGATCCAC 
GACTTTCTGG CTGCGCGCAA GCCCGTGGCG GCGGTCTGCC ATGCGCCGGC CGTCTTGGTG 
CACGTTCAGG GCGTCGACGG ACAGTCGGTG GTCAAGGGGC ATCGTGTCAC CGGCTTCTCG 
AACAGCGAGG AAGAGGCTGT GGGTCTGACC GGCGTCGTGC CGCTGCTGGT CGAGGACGCC 
CTCAAGGGCA AGGGCGGGCA TTACGAGCGC TCGACGACGG ATTTCGAGGC GTTCCAGTTG 
CGTGACGGCC TGCTGATCAC CGGCCAGAAC CCGGCGTCCA GCGCGCCGAC CGCCAAGCTG 
CTGTTGAGCG CCTTGACAGG GTAA
 
Protein sequence
MKILMVLTSH DRMGDTGNPT GFWLEEFVAP YYVFKDAGAD VTLASPKGGQ PPVDPTSTQP 
DALTEETRRF DGDDEAKAQL ANTHPLDTMR ADDFDAVFYP GGHGPLWDLT EDRHSQQLIH 
DFLAARKPVA AVCHAPAVLV HVQGVDGQSV VKGHRVTGFS NSEEEAVGLT GVVPLLVEDA 
LKGKGGHYER STTDFEAFQL RDGLLITGQN PASSAPTAKL LLSALTG