| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1283 |
|---|
| Symbol | |
|---|
| ID | 4027756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 1464297 |
|---|
| End bp | 1465892 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637966462 |
|---|
| Product | putative symporter YidK |
|---|
| Protein accession | YP_573337 |
|---|
| Protein GI | 92113409 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4146] Predicted symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGCCC TGACCCTGAT CTCGTTTCTT TTCTTTACCG GGCTCGTTGC CCTGATCACC
TGGCTGATCA CGCGCCGGGA TGATCTGCGC AGCACACGCG GCTATTTCCT GGCCGGGCGC
AGCCTGACCT TTCCGCTGAT CGCCGGCTCC CTGTTGATGA CCAACCTTTC CACCGAGCAG
ATGGTGGGCC TCAACGGTGC CGCCTTCACC GATGGATTGA GCGTCATGGC CTGGGAGGTG
GTGGCCGTCG TGGCCCTGGT GCTGCTGGCG CTGTTCTTCC TGCCGCGCTT TCTGCGCAGT
GGCATCGCAA CGGTGCCGCA GCTGCTGGAA ATCCGCTTCG ACCACGGCAC CCAGTTGATC
TGCAACATCA TCTTCCTGAT CGCGTATGCG GTCATCCTGC TGCCCATCGT GCTCTACTCC
GGTGCCATCG GCCTGCAGGG CATGCTCGAC CTGCAAGGAC TGACCGGTAT CGAATCCAGC
AGCTTCCTGC TCTGGGCCAC GGTATGGATC GTCGGGTTGA TCGGCGCGGT CTACGCGCTC
TTCGGCGGGC TGCGCACGGT GGCGGTGTCG GACACGCTCA ATGGCGTGGG GCTGCTCATC
GGCGGTTTCC TGATCGTGTT CTTCGCCCTC AATGCGGTCA GCGACGGCAA CGGCATCCTC
GCCGGCTGGG ACATTCTTAA CACCCAGCAT CCCGAGATGT TCAACTCGAT GGGACGCGAG
GATCAGGCGG TTCCCTTCGC CACGCTGTTT ACCGGTGTCT TCCTGATCAA TCTGTTCTAC
TGGACCACCA ATCAGCAGAT CATTCAGCGC ACGTTCGCCG CCAAGTCCCT GGCCGAGGGC
CAGAAAGGCG TGCTGCTGAC CGGTTTCTTC AAGCTGCTGG GGCCACTCTA TCTGGTACTC
CCGGGCATCA TTGCCTATCA CATGTATGCC GATCAGGGCA TCCAGGCCGA CGAGGCCTAT
GGCCATCTGG TCTTCGACAT TCTGCCGCCG TATCTGACCG GTTTCTTTGC CGCGGTGATG
GTCGGCGCCA TCCTGTCCTC GTTCAACTCG GCACTCAACA GCACCACCAC CCTGTTCAGC
CTGGGCATCT ACAAGGGCGT CATCAACAAG AACGCCGATG AAGCCCAGGT CGTCAAGGCG
GGCAAGATCT TCGGCTGGAT CATGGCCATC GCCGCCATGG TCATCGCACC GCTGCTGGCG
GGACAGGAAA GCCTGTTCAG CTACCTGCAG ACGATGAACG CGATCTACTT CATTCCCATC
CTCGCGGTGG TACTGGTGGG CCTGCTCACC AAGCGCGTGC CGGCGGTCGC CGCCAAGGTC
GGCCTGGTCG CGGGCTGTCT GTTGATCGCA GCAGGCTACT TCGTGCCACC CTTCAACAAG
ATTCTCGACG TCACCAGTCA GTATCACTTC GTGGCCGGCG TCTTCGTGCT GCTGATCGCC
ATCATGCTGA TCATCGGCAA GATCTGCCCG CGTGAGACCA AGTGGGTCCA TCGGGATGTC
GAGGCCGTCG ACCTGACGCC CTGGAAAGGC GCCTGGCCCG TAGGGCTGGT ACTGGTGCTG
TGCGTCATCG CCATCTATGC CGCCTTCGCC GGCTAG
|
|---|
| Protein sequence | MHALTLISFL FFTGLVALIT WLITRRDDLR STRGYFLAGR SLTFPLIAGS LLMTNLSTEQ
MVGLNGAAFT DGLSVMAWEV VAVVALVLLA LFFLPRFLRS GIATVPQLLE IRFDHGTQLI
CNIIFLIAYA VILLPIVLYS GAIGLQGMLD LQGLTGIESS SFLLWATVWI VGLIGAVYAL
FGGLRTVAVS DTLNGVGLLI GGFLIVFFAL NAVSDGNGIL AGWDILNTQH PEMFNSMGRE
DQAVPFATLF TGVFLINLFY WTTNQQIIQR TFAAKSLAEG QKGVLLTGFF KLLGPLYLVL
PGIIAYHMYA DQGIQADEAY GHLVFDILPP YLTGFFAAVM VGAILSSFNS ALNSTTTLFS
LGIYKGVINK NADEAQVVKA GKIFGWIMAI AAMVIAPLLA GQESLFSYLQ TMNAIYFIPI
LAVVLVGLLT KRVPAVAAKV GLVAGCLLIA AGYFVPPFNK ILDVTSQYHF VAGVFVLLIA
IMLIIGKICP RETKWVHRDV EAVDLTPWKG AWPVGLVLVL CVIAIYAAFA G
|
|---|
| |