Gene Csal_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1272 
Symbol 
ID4027745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1450886 
End bp1452376 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content71% 
IMG OID637966451 
Producthypothetical protein 
Protein accessionYP_573326 
Protein GI92113398 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCGG CATCGCCAGT GACACATGCC CTGTACGGGG CGGAGCAGGT TCGGACCCTG 
GATCGTCGCA TCATCGACGC CGGCGTGGCG GGGTTCGACT TGATGCAGCG AGCATCCCAG
GCCGCCTATG ACGTACTGCG TGCACGATGG CCCGGTGCGC GTCGGCTCAC GGTGTTGTGC
GGGGGCGGCA ACAATGCCGG TGACGGCTAC GTGATCGCGG CGTTGGCGGT GTGCGATGGC
CTCGATGTAC AACTGGTGGC CCTGCGTGAT CCGGCATGCC TGACGGGCGA CGCGGCACGG
GCATGCGCGC TGGCGCGGCG GGCCGGTGTG ACGCCGGTTG CCTGGCGGGA AGGCATGACG
CTGGATGGCG AGGTGCTGGT CGATGCGTTG CTGGGGACCG GGGCCTCGGG AGAGGTGCGC
GACCCCTTGC GGAGCGCGAT TCTGGCGATC AATGCCACGC GGCGCCCGGT ACTGGCGGTG
GACGTGCCCT CCGGGCTGTC GGCACAGACC GGTGGCATCG GAGGCGTCGC GGTACACGCC
ACGGTGACCG TCACGTTCAT TGCCGACAAG TTCGGGCTGC ATACCGGCGC CAGCGCGGAT
CATGTCGGCG AACTGGTCGT CGAGAGCCTG GGCACGGCCC CGGAGACCCA TGGCGACCTG
GTGCCGCTGG GCGAGTTGCT GGCGGCCGAG CAATTGCAGG CGGCGCTGCC GCCACGTGCC
CGAGGCAGCC ACAAGGGTGA CTTCGGGCAT CTGCTGGTGG TGGGGGGCGC CGTGGGGTTC
GGCGGCGCGG CGTTGATGGC CTGCGAGGCC GCATTGCGCA TGGGGTCGGG CAAGGTCAGC
CTGGCCACCG ATGCGGCGCA TGTCGCCGCG AGCCTGGTGC GCAGCCCCGA GGTAATGGCG
CGTGGCGTGC AGGCGGCGGC CGAGGCACAG CCGCTTCTTG CTCAGGCCGA CGCCCTGGTC
GTCGGTCCCG GTCTGGGGCG TGATGCCTGG GGGAAGGCGT TATGGCGGCT GGCACTCGAT
GCCGCCGTGC CCAGCGTCCT CGATGCCGAT GCTCTCAACC TGCTGGCCGA GGAGGCGCGC
GATCGCGACG ACTGGGTGCT GACGCCACAT CCCGGCGAGG CTGCACGCCT GCTGGGCAGC
ACCACCGCCG AGGTCCAGGC GGACCGTCGG GCAGCGGTGC TGGCGCTGCG CGAGCGTTAT
GGCGGCAGTG TGGTACTCAA GGGCGCGGGA ACCTTGATTG CCGACGCAGA TGGGGTCGCC
GTGTGTCCGT ATGGCAATCC CGGCATGGCC AGCGGGGGCA TGGGGGATGT GCTGTCGGGC
GTCATCGGGG CGCTGCTGGG GCAGGGCAGA ACGCCGGGGG AGGCTGCACG CCTGGGGGTC
CTGATCCATG CGCTGGCCGG TGACGCGGCG GCCCGGGCCG GGGGCGAGCG TGGCCTGGTC
GCCACGGATC TGGCATCCTA TGTGCGCGTG ATCGCCAACC CACGATCCTG A
 
Protein sequence
MTAASPVTHA LYGAEQVRTL DRRIIDAGVA GFDLMQRASQ AAYDVLRARW PGARRLTVLC 
GGGNNAGDGY VIAALAVCDG LDVQLVALRD PACLTGDAAR ACALARRAGV TPVAWREGMT
LDGEVLVDAL LGTGASGEVR DPLRSAILAI NATRRPVLAV DVPSGLSAQT GGIGGVAVHA
TVTVTFIADK FGLHTGASAD HVGELVVESL GTAPETHGDL VPLGELLAAE QLQAALPPRA
RGSHKGDFGH LLVVGGAVGF GGAALMACEA ALRMGSGKVS LATDAAHVAA SLVRSPEVMA
RGVQAAAEAQ PLLAQADALV VGPGLGRDAW GKALWRLALD AAVPSVLDAD ALNLLAEEAR
DRDDWVLTPH PGEAARLLGS TTAEVQADRR AAVLALRERY GGSVVLKGAG TLIADADGVA
VCPYGNPGMA SGGMGDVLSG VIGALLGQGR TPGEAARLGV LIHALAGDAA ARAGGERGLV
ATDLASYVRV IANPRS