Gene Csal_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1270 
Symbol 
ID4027743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand+ 
Start bp1449105 
End bp1449668 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content63% 
IMG OID637966449 
Productoligoribonuclease 
Protein accessionYP_573324 
Protein GI92113396 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.768994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGCG AACAGCCGCA AGCCCCGCGC AGCGACCTGC TGGTGTGGAT CGATCTGGAA 
ATGACCGGCC TCGACCCTCA GCGCGAGCGC ATCATCGAGG TGGCCACGCT GATCACCGAC 
AACGATCTGA ATCTGGTGGC CGAAGGGCCG GTGTTGGCGG TGCATCAGCC GGATGCCCTG 
CTGGCGGGCA TGGACGAGTG GAATACCCGT ACGCACGGTG ATTCGGGGCT CACGCAGCGT 
GTCCGCGAGA GTCGCATCGA TACCGCCGAG GCCGAGCGCC AGACCCTGGC GTTCCTCAAG 
CGCTATGTCA CGCCGAACAG CTCACCGATG TGCGGCAACA GCGTGCACCA GGATCGCCGT 
TTTCTGGTAC GCGAGATGCC CGAGCTGGCC GATTTCTTCC ATTACCGCAA TCTCGACGTG 
TCGACGCTCA AGGAACTGGC CAAGCGCTGG AATCCTCAGG CGCTGGAAGG CTTCGAGAAG 
CGCAATACGC ACCAGGCCAT GGACGACATT CGCGAGTCGC TGGCCGAATT GGCGCATTAT 
CGTCAGACGT TCTTGCGGGT CTAG
 
Protein sequence
MASEQPQAPR SDLLVWIDLE MTGLDPQRER IIEVATLITD NDLNLVAEGP VLAVHQPDAL 
LAGMDEWNTR THGDSGLTQR VRESRIDTAE AERQTLAFLK RYVTPNSSPM CGNSVHQDRR 
FLVREMPELA DFFHYRNLDV STLKELAKRW NPQALEGFEK RNTHQAMDDI RESLAELAHY 
RQTFLRV