| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1261 |
|---|
| Symbol | |
|---|
| ID | 4027582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 1439442 |
|---|
| End bp | 1440656 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637966440 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_573315 |
|---|
| Protein GI | 92113387 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCAAGT TCAGCGACCT GACCCGAATG CCGGACGCCC AAGGCCATTT CGGCCCGCAC
GGTGGCCGGT TCGTTTCGGA GACTCTGAGC TTCGCCCTGG AGGAGTTGGA GAAGGCCTAC
ATGAGCCTTC GCGACGATGC CGACTTCCAG GCCGAATTCG ACCGTGACCT GGCTCATTAC
GTGGGCCGCC CGTCTCCGCT GTATCACGCA CAGCGATGGT CCCAGCAGCT CGGCGGTGCG
CAGATCTGGC TCAAGCGCGA GGATCTCAAC CACACCGGGG CCCACAAGGT GAACAACACC
ATCGGCCAGG CGCTGCTCGC CAAGAAGAGC GGCAAGCCTC GGGTCATCGC CGAAACCGGT
GCCGGCCAGC ATGGCGTGGC CACGGCCACC GTCGCCGCGC GGCTGGGGCT CAAGTGCGAG
ATCTACATGG GGGCCGAGGA CGTCGAGCGC CAGAAGCTCA ACGTCTATCG CATGCGCCTG
CTGGGGGCCG AAGTGCATCC GGTCGAGTCC GGGTCGCGAA CCCTCAAGGA CGCCATGAAC
GAGGCGCTGC GCGACTGGGT GACCAATGTC GACGATACCT TCTACATCAT CGGTACCGTG
GCCGGCCCGC ATCCTTATCC GGCCATGGTG CGCGACTTCA CGTCGGTGAT CGGTCGCGAA
GCGCGCGAGC AGAGCTTTGC TCAGATCGGT CGCCTGCCGG ATGCCCTGGT GGCCTGTGTC
GGCGGCGGTT CCAATGCCAT CGGCCTGTTC TATCCCTTCC TCGAGGACGA GGACGTGGCC
ATGTACGGTG TCGAAGCCGG CGGCGACGGT GTCGAGACCG GGCGTCACGC CGCGCCGCTG
ACCGCCAATG CCCCCAGCGG GGTGCTGCAT GGCAACCGGA CCTACCTGAT GTCCGACGAG
GGGGGGCAGG TCTCGGATAC GCACTCGATC TCTGCCGGGC TCGACTATCC TGGTGTCGGC
CCCGAGCATG CGCTGTGGAA GGATGTCGGC CGGGTTCAGT ACGTGGCGGC CAACGACGAC
GCGGTTCTTG CCGCGTTCCG CGAGCTGACG CGCGTCGAGG GTATTATGCC CGCGCTGGAG
TCGGCCCATG CCCTGGCGCA TGCCAAGGTT CTGGCACCGA CCATGCGTCC CGACCAGCAC
ATCATCGTCA ATCTCTCCGG GCGTGGCGAC AAGGACATCC ACACGGTGGC CAAGATCGAC
GGTCTGGAAT TCTAA
|
|---|
| Protein sequence | MTKFSDLTRM PDAQGHFGPH GGRFVSETLS FALEELEKAY MSLRDDADFQ AEFDRDLAHY
VGRPSPLYHA QRWSQQLGGA QIWLKREDLN HTGAHKVNNT IGQALLAKKS GKPRVIAETG
AGQHGVATAT VAARLGLKCE IYMGAEDVER QKLNVYRMRL LGAEVHPVES GSRTLKDAMN
EALRDWVTNV DDTFYIIGTV AGPHPYPAMV RDFTSVIGRE AREQSFAQIG RLPDALVACV
GGGSNAIGLF YPFLEDEDVA MYGVEAGGDG VETGRHAAPL TANAPSGVLH GNRTYLMSDE
GGQVSDTHSI SAGLDYPGVG PEHALWKDVG RVQYVAANDD AVLAAFRELT RVEGIMPALE
SAHALAHAKV LAPTMRPDQH IIVNLSGRGD KDIHTVAKID GLEF
|
|---|
| |