Gene Csal_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1254 
Symbol 
ID4027575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1432596 
End bp1434065 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content66% 
IMG OID637966433 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_573308 
Protein GI92113380 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTAC GCAAGGTGGA TGTCGCCATC ATCGGTGCCG GCACGGCAGG ACTCGGCGCC 
TACCGAGCCG CCAAGGCACA CACCGACTCG GTGGTCATGA TCGAGGGCGG CCCCTATGGC
ACGACCTGCG CTCGTGTGGG CTGCATGCCC TCCAAGCTGC TGATCGCCGC CGCCGAGGCC
GCGCACCACG CTCGTGACAC GGCGCCCTTC GGGATCAACG TCAGCGGCGA AGTAAGCGTC
GATGGCCGTG CGGTGATGGA CCGCGTACGC CGCGAGCGCG ACCGTTTCGT CGGCTTCGTC
ATCGAGTCGG TGGAAGGCAT TCCCGAGGCG GACAAACTGC GCGGCTACGC GCGCTTCGCC
GATGCCCATA CCCTGATCGT CGATGAAGAA ACCCGTGTCG AGGCGAAGAA GGTGGTCATC
GCCAGCGGTT CCACCCCGAC CTACCCCAGT TTCTTCGAGG CCGCGGGCGA CCGCCTGGTC
ATCAACGACG ACGTCTTCGA ATGGGAGACC CTGCCGGAAT CGGTGGCTCT GTTCGGCCCC
GGTGTCATCG GCCTGGAACT GGGCCAGGCC TTGCACCGGC TCGGTGTGCG CCTGCGCATC
TTCGGTGTCG GTGGCGCCCT CGGCCCGTTG CAGGACGCCG AGATTCGCGA CTATGCCGAA
CGTGCATTCA ACGATGAGCT GTACGTCGAT CCCGATGCCA CCGTCGAGTC CATCGAGCGT
GACGGTGACA GCGTGGTCAT TACCTTCATC GAACGTACCA CCGGCGAGCG CCTGACCGAA
CGCTTCGACT ACCTGCTCGC GGCCACCGGC CGGCGCCCCA ACGTCGACAA GCTCGACATC
GAGGCCGCGC ACCTCAAGCT CGATGCACGC GGCGTCCCGG TCTACAACCG CCATACACTG
CAATGCCGGG GTGACGACGG CGCGCCGAGT CATGTATTCA TCGCCGGCGA TGCCAATCAC
GAGCTACCGC TGCTCCACGA AGCCTCGGAC GAGGGGCGCA TCGCCGGCGA CAATGCGGGG
CGCTATCCCG ATGTGCGCGC CGGGCATCGG CGCACGCCGC TGGGCGTGGT CTTCAGCGAT
CCGCAAATCG CCACCGTGGG AATGAGCTAT CCTCAACTTG AGACGCGCTA TGGCGACTGT
GACTGCTTCG CGGTCGGTGA AGTATCCTTC GAAAACCAGG GCCGTTCACG GGTCATGCGC
ATGAACAAGG GGCTGATGCA CGTCTATGCC GAGCAGGGAT CCGGCTTGTT CCTGGGTGCC
GAGATCTTCG GACCACGCGC CGAGCACCTC GGACACCTGC TGGCCTGGGC GCACCAGCAA
CGCCTGACCG TCAGCGAGAT GCTGGAGATG CCGTTTTATC ACCCGGTCGT CGAGGAAGGC
TTGCGCACCG CATTGCGCGA TCTCAACGCC AGGCTCCAGC TGGGGCCGGC GGTGGTCGAG
CGCTGCATGG AGTGCGGACC GGGCGACTGA
 
Protein sequence
MEVRKVDVAI IGAGTAGLGA YRAAKAHTDS VVMIEGGPYG TTCARVGCMP SKLLIAAAEA 
AHHARDTAPF GINVSGEVSV DGRAVMDRVR RERDRFVGFV IESVEGIPEA DKLRGYARFA
DAHTLIVDEE TRVEAKKVVI ASGSTPTYPS FFEAAGDRLV INDDVFEWET LPESVALFGP
GVIGLELGQA LHRLGVRLRI FGVGGALGPL QDAEIRDYAE RAFNDELYVD PDATVESIER
DGDSVVITFI ERTTGERLTE RFDYLLAATG RRPNVDKLDI EAAHLKLDAR GVPVYNRHTL
QCRGDDGAPS HVFIAGDANH ELPLLHEASD EGRIAGDNAG RYPDVRAGHR RTPLGVVFSD
PQIATVGMSY PQLETRYGDC DCFAVGEVSF ENQGRSRVMR MNKGLMHVYA EQGSGLFLGA
EIFGPRAEHL GHLLAWAHQQ RLTVSEMLEM PFYHPVVEEG LRTALRDLNA RLQLGPAVVE
RCMECGPGD