Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1250 |
Symbol | |
ID | 4027628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 1429203 |
End bp | 1429994 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637966428 |
Product | AraC family transcriptional regulator |
Protein accession | YP_573304 |
Protein GI | 92113376 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGCA GCATCCGTCT GACACCGCTC GACAATGCGG TCAAGCATCA CGATCATGCC TTCCACCAGA TCGTCATCGG CCTCGCCGGG CATGCCGAGT TCGAGATCGA GGGCCTGGGC GGCACCATTG CGCCGCTTTC CGGATGCATC GTGCCTACCA GTCATGTGCA CTACTACGAG GGCATCGGCG ACAATCGCCA GTTGATCCTC GACCTCCCCG ACGATGCCCC CTCGTTGACG GGCGCCCACC GCGAACTGGC CCGACTGTTC GATGCGCCGC GCTACTTCAC GCTCGACGAC CCCTTGCGCA ACTACCTCAA TTTCGTGGTG CAGGAAATGT CGCAACCGCG TCACGCCGAT GGCGAACTCC TCGCCACGAC GTTCCTGAGC TGTCTTCACG CTCGCCTGGC CCCGGACTTT CACCCTCTCG CGTCGGGTCG CCCCCTGGCT CTCGATGCCA TCGACCGTTA TATCGAAAAC CACCTCGCCG AACGCATCAC GGTCGGCGAC CTGGCTCGCC TGGCGTGCCT GAGCGAAGCC CACTTCAGCG AGCGGTTCCG CCGGCACACG GGACTGACGC CCTATCAATA CTTGTTGCGT CGGCGACTCG AACACGCCAG CGCGCTCCTG CGTGGCGCCG CCATCCCGCT CAGCGACGTC GCAGCGCGTA CCGGCTTCGC CAGCCAAAGC GCCCTCTCGC ACGCCTTCCG CCGCCACTAC GGTCAGCCAC CGTCTCGATT GCGGCGCAAT GGGGCGACGC CATTGGCGGC TACTCATCAC AACATCGACT AA
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Protein sequence | MTSSIRLTPL DNAVKHHDHA FHQIVIGLAG HAEFEIEGLG GTIAPLSGCI VPTSHVHYYE GIGDNRQLIL DLPDDAPSLT GAHRELARLF DAPRYFTLDD PLRNYLNFVV QEMSQPRHAD GELLATTFLS CLHARLAPDF HPLASGRPLA LDAIDRYIEN HLAERITVGD LARLACLSEA HFSERFRRHT GLTPYQYLLR RRLEHASALL RGAAIPLSDV AARTGFASQS ALSHAFRRHY GQPPSRLRRN GATPLAATHH NID
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