Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1249 |
Symbol | |
ID | 4027627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 1425819 |
End bp | 1429010 |
Gene Length | 3192 bp |
Protein Length | 1063 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637966427 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_573303 |
Protein GI | 92113375 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAATG CCAATACCAT GCTGGAAAAC GCCACCTGGA ACGATGAGCT CGACACGCTC TTTGCACGTG TCAGCGATCA TTACAGTGTC GACGAGAATG CCTATGTCGC CGAACTGGCC GCGGTGCTGC GCAGCGACGA CGAGGATTTC AAACGCATCG CCGCGCAGAC CGCCGAACTG GTACGCGACG TCCGCGACAT GGATACGGCA GTCGACTCCA TCGACGAGCT GCTTCAGGAA TACAGCCTCG ATACCCATGA AGGCTTGATG CTGATGTGTC TGGCCGAGGC GATGCTGCGC ATCCCCGACA AGGCCACCGC GGACGCCTTG ATCGAAGACA AGCTGGGCCC CGCCGACTGG AAGGCACACG TCGGCCAGAG CGAGTCCTGG TTCGTCAATG CGTCCACCTG GGGGCTGCTG ATGACCGGCC GTGTCCTTCA GCTCGATCAT CCGCGCGAGG GCAAGCCCGC CAACTTCATC AACAAGATGG TCAACCGCAT GGGCGAGCCG GTGATTCGTC GCGCCATGTA CCAGGCGATG AAGATCATGG GCAAGCAGTT CGTGCTCGGA CGTACCATCG ACGAGGCCCT GAAGCGCTCG CAGCCGCTGT TCGACAAGGG GTACACCTAC TCCTACGACA TGCTCGGCGA AGCCGCGCGC ACGCGCCCCG ACGCCGGGCG CTATTACGAC GATTACGCCA ATGCCATCGC GCGGGTCGGC GCCACCAGCC GCAAGCTGGA CGCCAAGACA CCGTCGCCCT CGGTCTCGAT CAAGCTCTCG GCGCTGCACC CGCGCTACGA GTTCGGCCGC CGCAGCCAGG TGCTCGACGA GCTCGTCGAC AGCGTCCGCC AGCTCGTCAC CCTGGCCCGC GAGAATGAGG TCGCCATTAC CATCGATGCC GAGGAGGCCG ATCGCCTCGA GTTGTCACTC GAGGTATTCC GCGCCGTCTT CGAAAGCGAT GTATGTCGTG GCTGGGGCCA CTTCGGCCTG GTCGTGCAAG CGTATTCGAA ACGCGCTCTG CCGGTGCTGC ATTACCTCAA TCGTCTGGCC GATCAATGCG GCGACGAGAT CCCGCTGCGC CTGGTCAAGG GCGCCTACTG GGATACCGAG ATCAAGGAGG CCCAGCAGCA AGGGCTCGAC GGCTATCCGG TGTTCACGCG CAAGGCGGGG ACCGATGTCG CCTATCTCGC ATGCGTGCAC TTTCTTCTCT CGGAGGAGAC CCGCGGGCGC ATCTTCCCGC AGTTCGCCAC GCACAACGCC CATACCATCA GCACCATCCT GGAGCTCGCC AACGATGCGG GTCGGCATTT CGAGTTCCAG CGTCTGCACG GCATGGGCGA GGCGCTCTAT GAAGTCGCCC TCAAGCGCGC CCCCCAGGGC ACCTACTGCC GTATCTACGC GCCGGTCGGC GCACACAAGG ACCTGCTGCC CTACCTCGTC CGGCGCCTGC TGGAAAACGG TGCCAACTCG TCCTTCGTCC ACCAGCTGGT CGATCCCCGC GTGCCGGTGG AAAGTCTCTG CGTCCATCCG CTGGAGACCC TGTCGCAATA CGAAACCTAT GCCAACTCCC GGATTCCGTT GCCGCGCGAC ATCTACGGGG AAAAACGCAA GAATTCCAAG GGTGTCAACT TGAACATCAA CAGTCAGTAT CAGCCCCTGA TCGATGCCAT GGCATCCTTC ATGGAGACCG AATACCACGC CAAGCCATTG CTCGCCTTCA CGGTGGAAGA CGACGCCGCG CAGTGCCACG ACGTGCTCAG CCCCTACGAC ACGCGTCAGC GCGTGGGTGA CGTGCAGTGG ACCACCAGCG AGCAGGCGCG CCGCGCCGTG GATGCCGCCT GGGCAGCGTT CCCCCGCTGG ACCGACACGC CGGTCGAGGA GCGCGCGGCG ATCCTCGAGC GCTTCGCCGA CCTTCTGGAA ACGCACCTCG CCGAGTTGAT GACACTGTGC TCGCGCGAGG GCGGCAAGCT GCTGACCGAT GGCGTCGACG AAATCCGCGA AGCCGTGGAC TTCTGCCGCT ATTACGCCAT GCGCGCCCGG GAGATGTTCG ACGCACCGAT CCCCCTGCCC GGCCCCACCG GTGAATCCAA CGAGCTGATT CTCTCCGGCA AGGGGGTGTT CGCCGCCATC AGCCCGTGGA ATTTCCCGGT GGCGATTTTC TGCGGCCAGA TGGTCGCTGC CGCCGTGGCC GGCAACCCGG TGCTGGCCAA GCCCGCCGAG CAGACCTCGT TGATCGCCCA TCGCGTCGTG GAGCTGCTCC ATGAAGCCGG CATGCCTCGC GATGTGGTGC AATTGCTGCC TGGCGACGGC CCCACCGTGG GCAGCGTGCT GACCGGCGAC GCTCGAATCA CCGGCGTGGT CTTTACCGGC GGCACCGATA CCGCGCAGAT CATCAATCGC GCTCTCGCCG ATCGCGAAGG CGCCGCGTTG CCGACCCTGA TCGCCGAGAC CGGCGGCATG AACGCCATGA TCGTCGACTC CACCGCGCTT CCCGAACAGG TCGTCGTCGA TGTGGTGGGC TCGGCGTTCC AGAGCGCCGG CCAGCGCTGC AGTGCCTTGC GCGTCTTGTA CCTTCAGGAG GATATCGCCG ACAGGGTCAT CGAGATCCTC AAGGGTGCCA TGGCGGAACT GCACATCGGC GACCCACGCG AGCTGGGCAC GGATGTCGGC CCGGTAATCG ACGAGGACGC CCACCGCCAG CTCAGCGACT ATATCGCACG CCTCAAGGAG GAAGGCCGCC TGGTCGCCGA GGCAACGCCC GATCCCGATG TCATCGCTCA CGGTCACTTC ATCGCACCCA CTGCATTCGA GGTCGAAGGC ATCGAGGCAC TGGAGCGCGA GCAATTCGGG CCGATATTGC ATATTGCCCG GTATCGCAGC GCGGATATCG ATCAGGTCAT CGATACCATC AACGCCAAGG GCTATGGCCT GACGTTCGGC GTGCATAGCC GCAACGAATC CTTTGCCGCT GAAATAGCGC GAAAAATTCG TGTGGGCAAT GTCTACGTCA ATCGTAATAT CATCGGCGCT GTCGTGGGCG TTCAACCGTT CGGTGGCCAA GGACTCTCGG GAACGGGGCC GAAGGCGGGC GGACCGCACT ATCTACAACG CTTTGCCACG GAAAAGACCC GTACCATCAA CACCGCCGCC CTTGGCGGCA ATGCGTCTCT GCTCGCGCTG GGAGACGAGT GA
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Protein sequence | MLNANTMLEN ATWNDELDTL FARVSDHYSV DENAYVAELA AVLRSDDEDF KRIAAQTAEL VRDVRDMDTA VDSIDELLQE YSLDTHEGLM LMCLAEAMLR IPDKATADAL IEDKLGPADW KAHVGQSESW FVNASTWGLL MTGRVLQLDH PREGKPANFI NKMVNRMGEP VIRRAMYQAM KIMGKQFVLG RTIDEALKRS QPLFDKGYTY SYDMLGEAAR TRPDAGRYYD DYANAIARVG ATSRKLDAKT PSPSVSIKLS ALHPRYEFGR RSQVLDELVD SVRQLVTLAR ENEVAITIDA EEADRLELSL EVFRAVFESD VCRGWGHFGL VVQAYSKRAL PVLHYLNRLA DQCGDEIPLR LVKGAYWDTE IKEAQQQGLD GYPVFTRKAG TDVAYLACVH FLLSEETRGR IFPQFATHNA HTISTILELA NDAGRHFEFQ RLHGMGEALY EVALKRAPQG TYCRIYAPVG AHKDLLPYLV RRLLENGANS SFVHQLVDPR VPVESLCVHP LETLSQYETY ANSRIPLPRD IYGEKRKNSK GVNLNINSQY QPLIDAMASF METEYHAKPL LAFTVEDDAA QCHDVLSPYD TRQRVGDVQW TTSEQARRAV DAAWAAFPRW TDTPVEERAA ILERFADLLE THLAELMTLC SREGGKLLTD GVDEIREAVD FCRYYAMRAR EMFDAPIPLP GPTGESNELI LSGKGVFAAI SPWNFPVAIF CGQMVAAAVA GNPVLAKPAE QTSLIAHRVV ELLHEAGMPR DVVQLLPGDG PTVGSVLTGD ARITGVVFTG GTDTAQIINR ALADREGAAL PTLIAETGGM NAMIVDSTAL PEQVVVDVVG SAFQSAGQRC SALRVLYLQE DIADRVIEIL KGAMAELHIG DPRELGTDVG PVIDEDAHRQ LSDYIARLKE EGRLVAEATP DPDVIAHGHF IAPTAFEVEG IEALEREQFG PILHIARYRS ADIDQVIDTI NAKGYGLTFG VHSRNESFAA EIARKIRVGN VYVNRNIIGA VVGVQPFGGQ GLSGTGPKAG GPHYLQRFAT EKTRTINTAA LGGNASLLAL GDE
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