| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1248 |
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| Symbol | |
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| ID | 4027626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 1424136 |
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| End bp | 1425626 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637966426 |
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| Product | Sodium/proline symporter |
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| Protein accession | YP_573302 |
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| Protein GI | 92113374 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.126391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATTG GTGTCTGGAT AAGCCTTTTC GCCTACTTTG CGCTCATGAT CGGCATCGGC
CTTTATGCCA TGCGCAAGTC CACGTCCACA TCCGAAGACT ACATACTGGG TGGCCGTACC
CTCAGTCCCA AAGTGGCGGC GCTGTCGGCC GGCGCTTCGG ACATGAGCGG CTGGCTGCTG
CTGGGGCTGC CCGGGGCAAT GTTCGTCTCC GGCCTGGGCT CGGCATGGAT CGGCATCGGC
CTGCTGGTGG GGGCTTTCTT CAACTGGCTC CTGGTCGCGC CACGACTGCG TGAACAGACG
GTTCACTATG GCAACGCGAT CACCATCCCC TCCTTCCTGG CCAACCGGTT CCCGACCCAG
GCCTTGTCGT TGAGGACGGT TTCCGCCATC GTCATCGTCG TCTTCTTCGC GGTCTACACG
GCGTCCGGCC TGGTGGCAGG CGGCAAGCTG TTCGAAAGCG CGTTTTCCGG GGTCATCAAC
ATCGGCGGGC TCAGCGATTA CGCGGTAGGC ATCATCATCA CCCTGGGCGT GGTGCTGGTC
TACACGGTCG TCGGCGGCTT CCTGGCCGTG AGCATGACGG ACTTCGTGCA GGGCTGCATC
ATGATGCTGG CGCTGGTGAT CATGCCGGCA GTCGTGATCT TCGGCGAAGG CGGCGGCGGC
TTCTCCCAGG CCTCGCAGAC GCTGAACGAA GTCGACCCCA CGCTCTTGTC ATGGACGGAC
GGCCTGACCT TCATCGGCTG GTTGTCCGCC GTGACCTGGG GCCTGGGCTA TTTCGGTCAG
CCGCACATCA TCGTGCGCTT CATGGCCATC CGGTCGCTGA AGGACGTGCC CGTCGCCCGC
AACATCGGCA TGAGCTGGAT GCTCATTTCC CTGATCGGCG CGATCTCGCT CGGGATCTTC
GGCCGCGCCT ACGCCATCCG CAATGGCATG GACGTAGAGG ATCCGGAAAC GATCTTCATC
ATCCTGGCGG ACCTGCTGTT CCACCCGCTG ATCACCGGCT TCCTCTACGC CGCATTGCTG
GCCGCGATCA TGAGTACCGT GTCCAGCCAG TTGCTGGTGG CCTCCTCGTC GCTGACCGAA
GACTTCTACC GCCTGTTCCT GCGCAAGGAA GCCACGGAGA AAGAGACCGT CGGCATCGGC
CGGGTCAGTG TCGTGCTGGT CGGCCTGGTG GCGGCCGTGA TTGCATCCGA TCCGGACTCT
CAGGTGCTGG GACTGGTGAG CAACGCCTGG GCAGGTTTCG GCGCGGCATT CGGTCCGCTG
ATCATCCTGT CGCTGATGTG GTCGCGCACG AACGGTGCCG GCGCCATCGC GGGCATGGTC
GTGGGTGCCG CTACGGTCAT GATCTGGATT TCTCTGGGCT GGAACGCATC GTTCATGGGC
GGTCCCGGCG TTTACGAGAT CATCCCCGGC TTCATCGCTG CCTTCATCGC GATCCTGGTG
GTGAGCAGCC TGACCAGCGA CGCCGGAGAA TACAAGCACA TCTCCCGCTG A
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| Protein sequence | MAIGVWISLF AYFALMIGIG LYAMRKSTST SEDYILGGRT LSPKVAALSA GASDMSGWLL
LGLPGAMFVS GLGSAWIGIG LLVGAFFNWL LVAPRLREQT VHYGNAITIP SFLANRFPTQ
ALSLRTVSAI VIVVFFAVYT ASGLVAGGKL FESAFSGVIN IGGLSDYAVG IIITLGVVLV
YTVVGGFLAV SMTDFVQGCI MMLALVIMPA VVIFGEGGGG FSQASQTLNE VDPTLLSWTD
GLTFIGWLSA VTWGLGYFGQ PHIIVRFMAI RSLKDVPVAR NIGMSWMLIS LIGAISLGIF
GRAYAIRNGM DVEDPETIFI ILADLLFHPL ITGFLYAALL AAIMSTVSSQ LLVASSSLTE
DFYRLFLRKE ATEKETVGIG RVSVVLVGLV AAVIASDPDS QVLGLVSNAW AGFGAAFGPL
IILSLMWSRT NGAGAIAGMV VGAATVMIWI SLGWNASFMG GPGVYEIIPG FIAAFIAILV
VSSLTSDAGE YKHISR
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