Gene Csal_1220 details

Gene Information

• Locus tag: Csal_1220
• Symbol: sucC
• ID: 4027541
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 1398168
• End bp: 1399397
• Gene Length: 1230 bp
• Protein Length: 409 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637966398
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: YP_573274
• Protein GI: 92113346
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGGCGA CCTCGTGGGT GGCCGCCACC ATTCGAGTCA CATGCAACCA ATGGCATGAC 
ACGATGAACC TTCACGAGTA TCAGAGCAAA CAGCTGTTTG CCGATTATGG TCTACCGGTG 
TCCAAGGGTT TCGCCGTGGA TACCCCCGAA GAAGCCGCCG AAGCGTGCAA GAAGATCGGT 
GGTGACAAGT GGGTCGTCAA GGCCCAGGTT CACGCGGGCG GCCGCGGCAA GGCCGGCGGC 
GTCAAGCTGG TCGAAAGCCC CGCCGACGCC AAGGCCTTCG CCGAGCAGTG GCTGGGCAAG 
AACCTGGTGA CCTTCCAGAC TGACGAGAAG GGTCAGCCGG TCGCCAAGAT CCTGGTCGAG 
AACTGCACCG ACATCGCCAA CGAGCTGTAC CTGGGCGCCG TCGTCGACCG TGGCACCCGC 
CGCATCGTTT TCATGGCTTC CACCGAAGGT GGCGTGGAAA TCGAGAAGGT TGCCGAGGAA 
ACTCCCGAGA AGATTCTCAA GGCCGAGATC GATCCCCTGG TCGGCGCTCA GCCGTATCAG 
GCGCGTGAGC TGGCCTTCGC GCTGGGTCTC GAAGGCGCGC AGATCAAGCA GTTCACCAAG 
ATCTTCCTGG GGCTGGCCAA GCTGTTCCAG GAAAAGGATC TGGCGCTGCT CGAGATCAAT 
CCGCTGGTGA TCACCGACGA AGGCAATCTG CATTGCCTCG ACGCCAAGAT CGGTCTGGAC 
GGCAATGCCC TGTATCGCCA CCCCGATCTG CAGGCGATGC GTGACCCGTC TCAGGAAGAC 
GAGCGCGAAG CGCATGCTCA GGAGTGGGAA CTCAACTACG TCGCCCTGGA AGGCAACATC 
GGCTGCATGG TCAACGGTGC CGGCCTGGCC ATGGGCACCA TGGACATCAT CAAGCTCAAC 
GGCGGCCAGC CGGCCAACTT CCTTGACGTT GGCGGCGGTG CGACGGAAGA GCGCGTCGGC 
GAGGCGTTCA AGATCATCCT GTCCGACGAT TCCGTGAAGG CCGTCCTGGT CAACATCTTC 
GGCGGCATCG TCCGTTGCGA CATGATCGCC GAAGGCATCA TCGGTGCCGT CGAGCAGGTC 
GGTGTCAACG TGCCGGTCGT GGTGCGTCTC GAGGGCAACA ACGCCGAGCT GGGCGCCGAG 
AAACTGGCAT CCAGTGGACT GAACATCATC GCTGCTACCA GCTTGACCGA CGCGGCCCAG 
CAGGTCGTCA AAGCAGCGGA GGGCAAGTAA 

 

Protein sequence

MTATSWVAAT IRVTCNQWHD TMNLHEYQSK QLFADYGLPV SKGFAVDTPE EAAEACKKIG 
GDKWVVKAQV HAGGRGKAGG VKLVESPADA KAFAEQWLGK NLVTFQTDEK GQPVAKILVE 
NCTDIANELY LGAVVDRGTR RIVFMASTEG GVEIEKVAEE TPEKILKAEI DPLVGAQPYQ 
ARELAFALGL EGAQIKQFTK IFLGLAKLFQ EKDLALLEIN PLVITDEGNL HCLDAKIGLD 
GNALYRHPDL QAMRDPSQED EREAHAQEWE LNYVALEGNI GCMVNGAGLA MGTMDIIKLN 
GGQPANFLDV GGGATEERVG EAFKIILSDD SVKAVLVNIF GGIVRCDMIA EGIIGAVEQV 
GVNVPVVVRL EGNNAELGAE KLASSGLNII AATSLTDAAQ QVVKAAEGK