Gene Csal_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1200 
Symbol 
ID4027345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp1376142 
End bp1377182 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content66% 
IMG OID637966377 
ProducttRNA-dihydrouridine synthase A 
Protein accessionYP_573255 
Protein GI92113327 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00742] tRNA dihydrouridine synthase A 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATA ACGCAACTGC TACGACCGGC ATGGATACTG GCATCAAGCG CCGCAAGCTG 
GATAGGACCT TCTCCGTCGC CCCGATGATG GATTGGACGA CCCGCGATTA CAGGGCCTTC 
GCTCGGACGC TGACCCGCGA GGCGCTGCTG TACACCGAGA TGGTCACGAC CGGAGCGATC 
CTGCATGGGT CCCCTCGCGA GCGCTTCCTG GGCTACAGCG ACGTGGAGCA CCCGCTGGCA 
CTGCAACTGG GCGGCAGCGA CCCTGCCGAG CTGGCAGAAT GCGCGGCGAT CGCCGAGGCG 
TGGGGTTACG ACGAGGTCAA TCTGAACGTG GGCTGCCCCA GCGACCGGGT ACAGAACAAC 
CTGATCGGGG CCTGCCTGAT GGCGTATCCC GACAAGGTCG CGGCAGCGGT GCGTGCCATG 
CAGGCCGCGG TCTCGATTCC CGTCACGGTG AAGTGCCGCA TCGGCATCGA CGACCAGGAC 
GAGGACGCCG ACCTGGCACG CTTCATCGGC ACGGTCGCGG ACGCCGGCGC CGACACCTTC 
ATCATCCACG CCCGCAAGGC GTGGCTCGAG GGACTCTCCC CCAAGGAAAA TCGCGATGTC 
CCGCCGCTCA ACTATGCCCG CGTGCATCGG CTCAAGACCC AGTATCCCGC GCTGCATATC 
GGCATAAATG GCGGTATCAA GTCCCTGGAA GACTGCCAGG CACACCTTGA GCACGTCGAT 
AGCGTGATGA TCGGGCGCGA AGCGTACCAG AACCCCTGGC TGCTGGCCGG CGTGGATGCC 
GCGCTCTATG GCACACCGTC GCCCGTGACC AGCCGGCAGG AGGCGGCACG TGCCCTGAGG 
CCCTATATCG CCGAGCGTCT GGCGGCAGGC GCCAAGCTCA ATCATGTCAC TCGCCACCTG 
CTGGGCTTGT TCCAGGGCTG CCCCGGCGGG CGTCAGTTCC GCCGCCACCT GTCGGAAAAC 
GCTCACCGTC CCGGCGCCGA TCTCGCGGTC TTCGACGAGG CCTTGAGCAA GGTACACGAC 
CCCGAGCGGG CCATCGCCTG A
 
Protein sequence
MSDNATATTG MDTGIKRRKL DRTFSVAPMM DWTTRDYRAF ARTLTREALL YTEMVTTGAI 
LHGSPRERFL GYSDVEHPLA LQLGGSDPAE LAECAAIAEA WGYDEVNLNV GCPSDRVQNN 
LIGACLMAYP DKVAAAVRAM QAAVSIPVTV KCRIGIDDQD EDADLARFIG TVADAGADTF 
IIHARKAWLE GLSPKENRDV PPLNYARVHR LKTQYPALHI GINGGIKSLE DCQAHLEHVD 
SVMIGREAYQ NPWLLAGVDA ALYGTPSPVT SRQEAARALR PYIAERLAAG AKLNHVTRHL 
LGLFQGCPGG RQFRRHLSEN AHRPGADLAV FDEALSKVHD PERAIA