Gene Csal_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1172 
Symbol 
ID4028111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1345063 
End bp1346199 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content68% 
IMG OID637966349 
ProductGTP cyclohydrolase II 
Protein accessionYP_573227 
Protein GI92113299 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.255393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACAGG TAGAACGTGC GATCTTCGAC GTGCGCCGCG GCTTGCCGAT CGTGCTGCGC 
ACCCCGCAAG ACGACGTCGT GATTCAGCCA CTGGAAGGCA TCGACGACGA GACCCTGACG
TCACTCGCCG CCCTGACCGG CCATGCGCCG GGCCTGGTGA TCACCGAGCA TCGACTCGCC
TGCCTGGGCG CGCCGATGCA CGAAGTCTCT CACGCCGTAC ACCTGCCGCT CAGCGCGGAC
CAGCGTGCCG GCGATGTCGT GGCCTGGGCC ATGGCAGCCG AGGCCGAAAC GCCCGAGGCA
TCGCAGCCCG CCACACCGGC GGAGACGGCG GCACTGGGCC TGATGCGACG CGGACTGCTG
GTGCCCGCCG CCTTGAGCGC CACGGTGGCC CCATCACGCC GCGAGGCGGT GAACGCCCTC
ATCGCCGACG GCACCTTGCT GGTCGTGTCC CTCGAGGATG TGCAGCGTTA CGACGAAGGC
GACATGACCT CCCTCAAGCG CATCAGCGAG GCGGAGATAC CGCTGGCCGA GGCTGATCGC
ACGCGATTCG TGCTGTTCCG CGAAAGCGAC GGCCTGCGCG AGCACCTGGC GGTACTGGTG
GGCGATCCTG CCCAATGGGC CGACGCCGTT CCGACGCGCC TGCACTCGGC GTGTCTCACC
GGCGACCTGT TCGGCAGCCT GCGCTGCGAT TGCGGCGAGC AATTGCGCGG CAGCGTGGCC
GCCATCGCCG AACGCGGTGG CGGCATTCTG CTGTACCTCG CCCAGGAAGG GCGCGGTATC
GGTCTGGCCA ACAAGCTGCG GGCCTACCAC CTGCAGGACG ACGGCCTGGA TACCGTCGAC
GCCGACCAGG TGCTGGGCTT CGGCGACGAC GAACGCCGCT ATCATGTCGC GCTGCAGATG
CTCGAGGCCC TTGCCGTCAC GCGCATCGAG CTGCTGACCA ACAATCCCGG CAAGATCGAC
GCCATGAGCC GAGGCGGTGT CGAGGTGGTC GGCCGCCAGG CCTGCTATGG CAAGCTCAAC
GAACACAACC GGCGCTACCT GAGCGCCAAG GCCGAACGCG CCGGGCACTG GCTGAACGAC
GTGCTGGAAC GTGACGGTAC GCACGCCACG CGACGCGATA TCAGCTCGCT CAAGTGA
 
Protein sequence
MRQVERAIFD VRRGLPIVLR TPQDDVVIQP LEGIDDETLT SLAALTGHAP GLVITEHRLA 
CLGAPMHEVS HAVHLPLSAD QRAGDVVAWA MAAEAETPEA SQPATPAETA ALGLMRRGLL
VPAALSATVA PSRREAVNAL IADGTLLVVS LEDVQRYDEG DMTSLKRISE AEIPLAEADR
TRFVLFRESD GLREHLAVLV GDPAQWADAV PTRLHSACLT GDLFGSLRCD CGEQLRGSVA
AIAERGGGIL LYLAQEGRGI GLANKLRAYH LQDDGLDTVD ADQVLGFGDD ERRYHVALQM
LEALAVTRIE LLTNNPGKID AMSRGGVEVV GRQACYGKLN EHNRRYLSAK AERAGHWLND
VLERDGTHAT RRDISSLK