| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1169 |
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| Symbol | |
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| ID | 4028108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 1338401 |
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| End bp | 1342210 |
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| Gene Length | 3810 bp |
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| Protein Length | 1269 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637966346 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_573224 |
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| Protein GI | 92113296 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGT TCGATGACGC CCCGGTGGCG CAGCCCCAGC CGCTGGTGCT CGAGCATCTG
CCGCTGGCCG GCCATCACCT GATCGAGGCC AGCGCGGGGA CCGGCAAGAC CTTTACCCTG
GCGGCGCTCT ACGTGCGTCT GGTGCTCGGT CCGTTGCCGG GGCGTGAGGC GTGTGACTAT
CCACGTCCGC TGCTGCCGCC GGAAATCCTC GTGGTGACGT TCACCGAAGC CGCCACCGCC
GAGCTGCGCG GGCGCATCCG CGCGCGCCTC AAGGAGGCCC GCGACTGGTT GCTGGCCCCG
CCCGAGGCCC GCCACGACGA TGTGCTCGGC GCCTTGCTCA CGCCCCTGGT GGAGGCCGGG
CAGACCGCCG TGGCAAGCGC CGCCAAGCGG CTCGATCAAG CCGCGCGACT GATGGACGAA
GCCGCCATCT TCACCATTCA CGGTTTCTGC CAGCGCATGC TGACCCGTCA TGCCTTCGAT
GCCGGCGCGC GCTTCGGTGC CGAGCTGCTG CAAGATGGCT CGACCTTGCT GACCCGGGTG
GTGGAGGATT ACTGGCGTTG TCATTTCTAT CCGCTCGCCG CGCATTGGCA GCGCGAGATT
CGCCGCCGCT GGGAAGGCCC GGAAGCGCTC AGCCAGGCAT TGCAGCCACT GCTCAAGGAC
GCACGGCCGC AACCCCTGTG GTGGGACGGC GAACGTGTCG AGGCCCCCGC ATCGCTGACG
ACATTGCTGG GCGACGCCGA GCGCGCGCTG GCGGCACGCC AGGCGCTGGA GGATTCGCTG
CGCCAGGCCT GGGATCGCGA GGCCATCGCC GGTTGCCTGA ACGAGGCCTT CTCGCGCGGC
GCGCTCAACA GGAACAGCTA CAAGCCGGAC GAACTCGATA CGCGGCTGGC GGCGTTCGAG
CAATGGTTGG CGACCTTCGA GGCCGATGAC GGCACGACCG ACAGCCAGGG CCGTTTCTGG
CTGAGTCAGG CCAAGCTCGA GAAGGCCACC AAGAAAGGCC ACGACGTGCC CACGCATCCG
TTCTTCGCCC GGCTGGACGA ACTGGCGGAG ACCGCCACGC CCTTCGATGT CCTGGCCCCG
CGACTGCTGG CCCACGCGCG CGACACCGTG GCGGCGATGT TCGCCGCCGA GAAGCGTCGC
CAGGGGTTGT GGGAATTCGG CGATCTGCTG CAGGACCTGG ACGCCGCACT CGACCCCGAA
GCCGCGCCGG AGGCGGCCTG GCGGCTGGCG GGACGCATTC GCCAGGCCCT GCCGGTGGCG
CTGATCGACG AGTTTCAGGA CACCGACCCA CTGCAGTACC GCATCTTCTC GCGTATCTAT
CGTGCCCCTG AGGCCGATGC CGACACCACC ACGTTGTTGA TGATCGGCGA TCCCAAGCAG
GCGATCTACG CCTTTCGCGG TGCCGACATC GAGACCTATC TGGCGGCGCG CCGCGAGACC
CCCAGCCGTT TCACCCTGAC GCGCAACTTC CGCTCCAGCG TGGCCATGGT CGAGGCGGTC
AACCGCCTGT TCGCACGACA TCCCACGCCG TTCGGCAGCG ACGAGATTCC CTTCGTCGAG
GTCGCGGCCA AGGGGCAGAA GGCGCGTCTT TGCAACGCCG ACGGGCAGGA GGTGGCGGCG
TTGGGTGCCT GGTGGCCGGG TGACGAACGC CATGCGAAGG CCGACTATCA GGCGAGCATG
GCCAGCGCCG CGCGGGCCGA GGTGCAGCGG GCGCTCGAGG GCGGCTGGCA TTTCGTCGAC
GAGAAGGGCG GGCAACGCGA TGTACGCCCG GCGGATATCG CGATCCTGGT ACGCAAGGGG
AGCGAGGCGC TGGCGGTACG CCGCGCGCTG GCCGAGGGCG GTATTCGCAG CGTGTATCTC
AGCGAACGCG CCAGTGTCTT CGATACCGCA CTGGCCTTCG AGCTGCTGCA GCTCTTCGAG
GCGGTGGCGC AGCCGCGCCA GGACGCGCGC CTCAAGGCCG CCCTGGCGAC GCGGTTGCTC
AACGACAACC CGGCGGCACT GGAGACCTTG CTCGCCGACG AGCTGGCCTG GGAGCGCGAG
GTCGAGCGCT TCGCCGACTA TCACCGCCAG TGGCAGCGGC GTGGCGTGCT GCCGATGCTG
CGCGCGGTGA TGCGCGATTT CCGCGTGGCC GAGCGCATGG GAGCGCGCGA CGACGGCGAG
CGGGCGCTTA CCGACCTGCT GCATCTCGGG GAACTGGCGC AGACGGTGTC GGCGCGTCTC
GACGGCGAGC ATGCGTTGCT GCGCTGGTGG CATCGCGCGC TCGTCGAGGG CACCCGACAA
CTCGATGCCG AGGCCGTCAG TCAGCGCCTG GAAAGCGACG AGGACCTGGT CAAGGTGGTC
ACCATCCACA AGGCCAAGGG ACTCGAGTAC CCCATCGTGC TGTTGCCGTT CGTGTGCGAT
TACCGCCCGG CGGAGCCGGA GCGCGGGACC GGACTGCTCG AATGGCGCGA CCCCCGGCAT
GGCCGCGCGC TGGTACATGG CGCCGATGAC GAGCAACTGG CCGCCGCCGA ACGTGCCCGG
CTGGATGAAG ACGTGCGGCT TCTCTATGTG GCGTTGACGC GGGCCGCGCA CGCCTGTCGC
CTGGGCGTGG CGCATCTGGG GCGCGGTCGT GGCACCAGTG GTTGCCTGCA CGAGACGGCA
CTGGGTCGGT TGCTCGGCTG CGAGGCCGAC GACCAGGCGC ATGACGTGCG CGAACGTCTC
GCGGCGGCGC TGAGTGTCGA GGCCTGCCCC GCGCCGCCCG GGCATCGCTT GCGCGTTCGT
CACGCCCTGC CCGCCGTGGC GTCGGCGCGA CGTTTCAACG GCGGCATCGA CGACGACTGG
TGGATCGCCT CGTACTCGGC GTTGATCGTC GACGCCCGCC TTGCACCGGC GGGCGAGGAG
GCCTCGATGA CGTGGGATGC CCCGGCGACC CTGGATGTCG AGGTCAGTCG CGAGCAGGAC
CCGGTGCCGC GTCCTGCGGT GCGCACCCTG CGCGACTTTC CTCGCGGTCC GCGTCCCGGT
ACCTTCTTGC ACGGCTTGCT GGAGGCGGTG GACCTCGATC GCCTGCGCGA GCCGGCCTAT
CGCGACGAGT TGCAACGCCT GGTCAGCACG CGCTTGCACC TGGGGGGCTT CGAGCCCGAA
TGGGCGCCGC TGCTGCTCGA CTGGCTGTGC ACGGCATTGC CGACGCCTTT CCCGGGGCAC
GCGGGGACCG AGATTCGTCT CGACGGCCTG GCGGCCTGGC GCCCCGAGCT GGAGTTCTGG
CTGCCTGCCC ACCAGGCGTG GAGCGCGCCG CTCGACGCCC TGGTCTCGGC CTTCGAGCCC
TTGCCCGAGC CGCGTCCCCG GCTGGCGCCC CGCAAGCTCA ACGGCATGCT CAAGGGGTTC
ATCGACCTGG TGTTCGAAGC CGAGGACGGC CGCTGGTACG TCCTCGACTG GAAATCCAAT
CATCTGGGCG ATGCGCCGGC GGATTATCGT CCCGAGGCCT TGGCCGAGGC GATGGTCGAG
CATCGTTACG ACCTGCAGTA CGTGCTGTAC GTGCTGGCAT TGCACCGTCT GCTGACGGCA
CGCCTCGACG ATTACGATTA CGACACCCAC ATGGGGGGCG CCTGTTACCT GTTCCTGCGC
GGCGTGGACG GCACGCCGGG GCAGGGGGTG TTTCAGCGCC GCCCCGAGCG CCGCCTGATC
GAAGCGCTGG ATGCCTGGCT GGAGGGCGAC ACGGGCCCCG TCGAGGCGTT GCGTGCGACA
CTGGAAGAGA GTGCGGCGCC ACGTGCGCAG CGGCATGACA TCGAGGCAGC CATGACACAG
GCATCGTCAG CAACCCGGAG CAGCCCATGA
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| Protein sequence | MTTFDDAPVA QPQPLVLEHL PLAGHHLIEA SAGTGKTFTL AALYVRLVLG PLPGREACDY
PRPLLPPEIL VVTFTEAATA ELRGRIRARL KEARDWLLAP PEARHDDVLG ALLTPLVEAG
QTAVASAAKR LDQAARLMDE AAIFTIHGFC QRMLTRHAFD AGARFGAELL QDGSTLLTRV
VEDYWRCHFY PLAAHWQREI RRRWEGPEAL SQALQPLLKD ARPQPLWWDG ERVEAPASLT
TLLGDAERAL AARQALEDSL RQAWDREAIA GCLNEAFSRG ALNRNSYKPD ELDTRLAAFE
QWLATFEADD GTTDSQGRFW LSQAKLEKAT KKGHDVPTHP FFARLDELAE TATPFDVLAP
RLLAHARDTV AAMFAAEKRR QGLWEFGDLL QDLDAALDPE AAPEAAWRLA GRIRQALPVA
LIDEFQDTDP LQYRIFSRIY RAPEADADTT TLLMIGDPKQ AIYAFRGADI ETYLAARRET
PSRFTLTRNF RSSVAMVEAV NRLFARHPTP FGSDEIPFVE VAAKGQKARL CNADGQEVAA
LGAWWPGDER HAKADYQASM ASAARAEVQR ALEGGWHFVD EKGGQRDVRP ADIAILVRKG
SEALAVRRAL AEGGIRSVYL SERASVFDTA LAFELLQLFE AVAQPRQDAR LKAALATRLL
NDNPAALETL LADELAWERE VERFADYHRQ WQRRGVLPML RAVMRDFRVA ERMGARDDGE
RALTDLLHLG ELAQTVSARL DGEHALLRWW HRALVEGTRQ LDAEAVSQRL ESDEDLVKVV
TIHKAKGLEY PIVLLPFVCD YRPAEPERGT GLLEWRDPRH GRALVHGADD EQLAAAERAR
LDEDVRLLYV ALTRAAHACR LGVAHLGRGR GTSGCLHETA LGRLLGCEAD DQAHDVRERL
AAALSVEACP APPGHRLRVR HALPAVASAR RFNGGIDDDW WIASYSALIV DARLAPAGEE
ASMTWDAPAT LDVEVSREQD PVPRPAVRTL RDFPRGPRPG TFLHGLLEAV DLDRLREPAY
RDELQRLVST RLHLGGFEPE WAPLLLDWLC TALPTPFPGH AGTEIRLDGL AAWRPELEFW
LPAHQAWSAP LDALVSAFEP LPEPRPRLAP RKLNGMLKGF IDLVFEAEDG RWYVLDWKSN
HLGDAPADYR PEALAEAMVE HRYDLQYVLY VLALHRLLTA RLDDYDYDTH MGGACYLFLR
GVDGTPGQGV FQRRPERRLI EALDAWLEGD TGPVEALRAT LEESAAPRAQ RHDIEAAMTQ
ASSATRSSP
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