Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1168 |
Symbol | |
ID | 4028107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 1334772 |
End bp | 1338404 |
Gene Length | 3633 bp |
Protein Length | 1210 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637966345 |
Product | DNA helicase/exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_573223 |
Protein GI | 92113295 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAGCG TCATACACGC CAACCACCTC GAGGACCTGG GGACGCTCGC GCTCGATGTC ATTCGGCGCC ATCGTCAACC GCCGCTGGTG CCGGAAACCT TCCTCGTGCA ATCCAACGGC ATGGCGCAGT GGCTGCGCTT GACCCTGGCC GAGGCCGACG GCATCGCCGC CTCGGTGGAC TTTCCGCTGC CTTCCAGTTT CGTGTGGCGC GCCTATCGCG CGGTGCTGGG AGACGACATC CCCGAGCAGT CCCCGTTCGA CAAGACTCCC CTGGCCTGGC GGTTGATGGC GTTGCTGGAA CGTTGCCTCG ATCCCGAGAC GTCTCCCGAC GATCCGACGT GCTACGCGCC GCTGCGCGAC TATCTCCAGG GCGAGGCACT GGAGGCGAGT CCCTTGCCGG GCGCCGCGGA GGAGGCACGC GAACGGCGTC GCTGGCACCT GGCGGTGCGT CTCGCCGACC TCTTCGACCA ATACCTGATC TACCGCCCCG AATGGATCGA GGCCTGGGAA CGAGGCGAAC ACGCGCCCGC GGACCTGCCC GACGACCAGC GCTGGCAGCC GGCGCTGTGG CGCGCGCTGA TCGAGGACGC CCCGGCCGCT GCGCGCGAGC ACCACCGCGC ACGCCTGCAT CGGCGCTTTC TCGACGCCGC CCGGGGGCTG CGCAAGCGGC CCCGCGACGT GCCGCCCCGT GTCTTCGTGT TCGGGATCTC GGCGCTGCCC GCACAGACGC TGGAGGCCTT GCACGCGCTC TCCGGTGTGG TCGATGTGTT CTTGATGATC GCCAACCCCT GCCGTCATTA CTGGGGGGAC ATCGTCTCCG ACCGTGATGC CATCAAGCGG GCCGGACGAC TGTCGTCGCA GGCCCGGCGT GAGCAGGAGG CGCGCCACCC CGAGGCGCCG TGGCTGGCCG AGCTCGACGA GGAGGCCCTG CATCTGCATG CCAACCCGTT GCTGGCGGGG TGGGGCACGC AGGGGCGCGA CTTCATCGTG GGCCTGTACG AGTTCGAAAG CGACCGCGGG TTCGATCTCG AAACCGATGT CTTCCGCGAC ATGGCGCCCG AGCAGTCGCC GACATTGCTG CAGCAGTTGC AGCAGGACGT GCTCGAGCTG GTGCATCCCG GCGAGCGTGC CCGGCGTGAG GGCGGCCCGC GAAGGATCGC CGAGGATGAC GAGTCGCTGT CCCTGGTCAG CGCTCACTCA CCGCTGCGCG AGGTGGAGAT CCTGCACGAC CGTCTGCTGG CGGCCTTCGA GCGCGCCGAG GCGGCGGGCC AGCCGCTGCG TCCCCGCGAC ATCATCGTCA TGGTGCCGGA CATCGACCGC TATGCCCCCT GTATCGAGGC GGTCTTCGGC CAGTTGCCGC CATCGCATCC CCGACACATT CCCTTCACCA TCGCCGACCA GGTGGCCAGC GAGGCACACC CGCTCATGGC CCTGGCGCTG CTGCTGCTCG AGCTGCCCGA ACGCCGCCTG ACGGTGAGCG AGGTGCTCGA CGCCCTGGAA GTCCCTGCCT TCCGCACCGC CTTCGCCATC GACGAAGCCG AGCTCGAGCG GCTCCGCCAA TGGCTGGCGG GCAGTGGCGT GCGCTGGGGG CTCAGCGCAG AACATCGCGA CTCGCTGGGG TTCCCGGCGC TGGGCGAGAA CAGCTGGCGG TTCGGACTGT CGCGCATGCT GCTGGGCTAT GCCGTGGGGG AGCCCTCGGC CGGCGGGGCG CGAGACGATA GTGAAGACTC ACTGGGGCAT GCCCCCTCGG GGGATTTCCA GGGCATCGTG CCCTATGCCG AAGTCGGCGG CCTGGAGGCC GATCTGGCGG GGCGTGTGGC AACGTTGCTG AGTACCCTGG AGCAGCAGTG CGCAGCGCTG GGCGAGCGCT TGACGCCGAT GGCGTGGCTG GGCCGTTTGC AGGCGTTGTT CGCGGCCTGC CTGCAGCCTG GCACGGCGGA TGAACACGAT GTCATGGCGC GTCTCGACGC GGCCCTGGCG CGTTGGGCCC AGCAATGCCG GCATGCCGAT TTCGAGGAGC CGGTGGGGCT CGGTGTGGTG CGCGATGCCT TGCGTGCCGA ACTGGACGAG GGCGGCCTGG CGCAACGCTT TCTGGCGGGC AAGGTCAATT TCGCCACCTT GATGCCAATG CGGGCCATTC CGTTCCGCGA GGTGTATCTG CTGGGCATGA ACGACGGCGA TTATCCGCGT GTGCGCCAAC CCCAGGACTT CGACCTGATG GCCACGCGGC CGCGTCCCGG TGACAGGTCG CGGCGCGACG ACGACCGCTA CCTGATGCTC GAGGCCATGC TGTCGGCGCG CGCCAAGCTG ACGCTTTCCT GGGTGGGGCA CGATGTGCGC GACAACACGC CGCGTCCGCC CTCGGTGCTG ATCGGCGAGT TGCTCGATAC CCTCGAGCAG GGGTGGGACG TCCCCGAGGA CGGCGCCGGT TCGCGTGACG CGCGGCTGGC ACGCCGGCTG ATCGAGACGC ACCCGTTGCA GCCCTTCTCG CGCCGCTACT TCGAACGCGA CGATCCACGT TTCACCTACG AGGCGAGCTG GGAAGCCTTG TACGCGACGC CTGAAGACAC CGCCGCGGCG ACGGCGGACG GCGCCCCCTC GCCGGATGCC TCGATGGCAT CGCTGCCTGA CGAGCCCTTG TCGCTGGGCG ACCTGCAACG CGTGCTGCGC CGCCCGTGGA CGGTCTATCT CGGGCGCCTG GGGGTTCATT ACGTCGATCC CCACGTCCCC GACGAGGACA ACGAGCCCTT CGCGCTGGAC GGCCTCGAGG ACCATGGGCT CAAGCGCGAG CTGCTCGACG GCGCGCGCGG GGGCGTGGCA CTCGCCAGCG TCGCCGAGCG GCTGCGCCTG GCCGGCCGCC TGCCAACGGC GGGCTTCGGC GAGGCCTTGA TCGAGCCGCG TCTGGCCCGT TTGTCGCGCC AGGTGGAAAG CTGGCGTCGC GATGTGGCCG CCTGCACTGC CGCCTCGCCG TTTCTCGCCC GCTTCCAGGG GGGCGCGTCG GCGCTGACGC TGGAGGCACG CCTCGACGAC GTGTTCGCCG CGCCGGAGGA TGGCGCCGCG CCCTGGTGCC TGATGACGCT GGAGCCCGGG CATTACGGCC ACTTGAAGGT CGAAGGCACG GGGCCGCACC GACACGTCGG CAAGGTGCAT CGACTCTACG GCGGGTATCT GCGCTGGCTG CTCGCCAATG CCACGCTGGA GGCACCCTGC AGCTGGACGG CGGTCTTCGA GGATCGTTGC CTGAGCTTGC CGGGAATGGC CGCCGCCACG GCGCGACAGC AGCTCGCGAC CTGGCTGGAC GCCTGGGCGC GTGCCTACCG CATGCCCTGG CCGGCGATCG GCGAGGTGGC ACAAGAGATC TGGAAACGCG TGCCGCGCGA GACCTGCGAG GCCCTGCAGG CCGGGGAGCC GCTGGAGAGC GGCCTGCGCG AGGCGCTGAT CGCACGTTAC GAAACCGATG CCTATGCCGG TCCGGCGGCC CTGAGGGCAC GCGACGGCGC CCTGGGACAG CTGTGGCCCG ATTTCGCCGC CTTCGAGGCG GCAGGGGGCG TCGCGGCCTC GCTGACGCTC TACGCGCCCT TGCTAGACAT GCTGGCGCAG GTGACCCAGC GAGTACATGG AGGACGCGCA TGA
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Protein sequence | MFSVIHANHL EDLGTLALDV IRRHRQPPLV PETFLVQSNG MAQWLRLTLA EADGIAASVD FPLPSSFVWR AYRAVLGDDI PEQSPFDKTP LAWRLMALLE RCLDPETSPD DPTCYAPLRD YLQGEALEAS PLPGAAEEAR ERRRWHLAVR LADLFDQYLI YRPEWIEAWE RGEHAPADLP DDQRWQPALW RALIEDAPAA AREHHRARLH RRFLDAARGL RKRPRDVPPR VFVFGISALP AQTLEALHAL SGVVDVFLMI ANPCRHYWGD IVSDRDAIKR AGRLSSQARR EQEARHPEAP WLAELDEEAL HLHANPLLAG WGTQGRDFIV GLYEFESDRG FDLETDVFRD MAPEQSPTLL QQLQQDVLEL VHPGERARRE GGPRRIAEDD ESLSLVSAHS PLREVEILHD RLLAAFERAE AAGQPLRPRD IIVMVPDIDR YAPCIEAVFG QLPPSHPRHI PFTIADQVAS EAHPLMALAL LLLELPERRL TVSEVLDALE VPAFRTAFAI DEAELERLRQ WLAGSGVRWG LSAEHRDSLG FPALGENSWR FGLSRMLLGY AVGEPSAGGA RDDSEDSLGH APSGDFQGIV PYAEVGGLEA DLAGRVATLL STLEQQCAAL GERLTPMAWL GRLQALFAAC LQPGTADEHD VMARLDAALA RWAQQCRHAD FEEPVGLGVV RDALRAELDE GGLAQRFLAG KVNFATLMPM RAIPFREVYL LGMNDGDYPR VRQPQDFDLM ATRPRPGDRS RRDDDRYLML EAMLSARAKL TLSWVGHDVR DNTPRPPSVL IGELLDTLEQ GWDVPEDGAG SRDARLARRL IETHPLQPFS RRYFERDDPR FTYEASWEAL YATPEDTAAA TADGAPSPDA SMASLPDEPL SLGDLQRVLR RPWTVYLGRL GVHYVDPHVP DEDNEPFALD GLEDHGLKRE LLDGARGGVA LASVAERLRL AGRLPTAGFG EALIEPRLAR LSRQVESWRR DVAACTAASP FLARFQGGAS ALTLEARLDD VFAAPEDGAA PWCLMTLEPG HYGHLKVEGT GPHRHVGKVH RLYGGYLRWL LANATLEAPC SWTAVFEDRC LSLPGMAAAT ARQQLATWLD AWARAYRMPW PAIGEVAQEI WKRVPRETCE ALQAGEPLES GLREALIARY ETDAYAGPAA LRARDGALGQ LWPDFAAFEA AGGVAASLTL YAPLLDMLAQ VTQRVHGGRA
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