Gene Csal_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1168 
Symbol 
ID4028107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1334772 
End bp1338404 
Gene Length3633 bp 
Protein Length1210 aa 
Translation table11 
GC content70% 
IMG OID637966345 
ProductDNA helicase/exodeoxyribonuclease V, gamma subunit 
Protein accessionYP_573223 
Protein GI92113295 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAGCG TCATACACGC CAACCACCTC GAGGACCTGG GGACGCTCGC GCTCGATGTC 
ATTCGGCGCC ATCGTCAACC GCCGCTGGTG CCGGAAACCT TCCTCGTGCA ATCCAACGGC
ATGGCGCAGT GGCTGCGCTT GACCCTGGCC GAGGCCGACG GCATCGCCGC CTCGGTGGAC
TTTCCGCTGC CTTCCAGTTT CGTGTGGCGC GCCTATCGCG CGGTGCTGGG AGACGACATC
CCCGAGCAGT CCCCGTTCGA CAAGACTCCC CTGGCCTGGC GGTTGATGGC GTTGCTGGAA
CGTTGCCTCG ATCCCGAGAC GTCTCCCGAC GATCCGACGT GCTACGCGCC GCTGCGCGAC
TATCTCCAGG GCGAGGCACT GGAGGCGAGT CCCTTGCCGG GCGCCGCGGA GGAGGCACGC
GAACGGCGTC GCTGGCACCT GGCGGTGCGT CTCGCCGACC TCTTCGACCA ATACCTGATC
TACCGCCCCG AATGGATCGA GGCCTGGGAA CGAGGCGAAC ACGCGCCCGC GGACCTGCCC
GACGACCAGC GCTGGCAGCC GGCGCTGTGG CGCGCGCTGA TCGAGGACGC CCCGGCCGCT
GCGCGCGAGC ACCACCGCGC ACGCCTGCAT CGGCGCTTTC TCGACGCCGC CCGGGGGCTG
CGCAAGCGGC CCCGCGACGT GCCGCCCCGT GTCTTCGTGT TCGGGATCTC GGCGCTGCCC
GCACAGACGC TGGAGGCCTT GCACGCGCTC TCCGGTGTGG TCGATGTGTT CTTGATGATC
GCCAACCCCT GCCGTCATTA CTGGGGGGAC ATCGTCTCCG ACCGTGATGC CATCAAGCGG
GCCGGACGAC TGTCGTCGCA GGCCCGGCGT GAGCAGGAGG CGCGCCACCC CGAGGCGCCG
TGGCTGGCCG AGCTCGACGA GGAGGCCCTG CATCTGCATG CCAACCCGTT GCTGGCGGGG
TGGGGCACGC AGGGGCGCGA CTTCATCGTG GGCCTGTACG AGTTCGAAAG CGACCGCGGG
TTCGATCTCG AAACCGATGT CTTCCGCGAC ATGGCGCCCG AGCAGTCGCC GACATTGCTG
CAGCAGTTGC AGCAGGACGT GCTCGAGCTG GTGCATCCCG GCGAGCGTGC CCGGCGTGAG
GGCGGCCCGC GAAGGATCGC CGAGGATGAC GAGTCGCTGT CCCTGGTCAG CGCTCACTCA
CCGCTGCGCG AGGTGGAGAT CCTGCACGAC CGTCTGCTGG CGGCCTTCGA GCGCGCCGAG
GCGGCGGGCC AGCCGCTGCG TCCCCGCGAC ATCATCGTCA TGGTGCCGGA CATCGACCGC
TATGCCCCCT GTATCGAGGC GGTCTTCGGC CAGTTGCCGC CATCGCATCC CCGACACATT
CCCTTCACCA TCGCCGACCA GGTGGCCAGC GAGGCACACC CGCTCATGGC CCTGGCGCTG
CTGCTGCTCG AGCTGCCCGA ACGCCGCCTG ACGGTGAGCG AGGTGCTCGA CGCCCTGGAA
GTCCCTGCCT TCCGCACCGC CTTCGCCATC GACGAAGCCG AGCTCGAGCG GCTCCGCCAA
TGGCTGGCGG GCAGTGGCGT GCGCTGGGGG CTCAGCGCAG AACATCGCGA CTCGCTGGGG
TTCCCGGCGC TGGGCGAGAA CAGCTGGCGG TTCGGACTGT CGCGCATGCT GCTGGGCTAT
GCCGTGGGGG AGCCCTCGGC CGGCGGGGCG CGAGACGATA GTGAAGACTC ACTGGGGCAT
GCCCCCTCGG GGGATTTCCA GGGCATCGTG CCCTATGCCG AAGTCGGCGG CCTGGAGGCC
GATCTGGCGG GGCGTGTGGC AACGTTGCTG AGTACCCTGG AGCAGCAGTG CGCAGCGCTG
GGCGAGCGCT TGACGCCGAT GGCGTGGCTG GGCCGTTTGC AGGCGTTGTT CGCGGCCTGC
CTGCAGCCTG GCACGGCGGA TGAACACGAT GTCATGGCGC GTCTCGACGC GGCCCTGGCG
CGTTGGGCCC AGCAATGCCG GCATGCCGAT TTCGAGGAGC CGGTGGGGCT CGGTGTGGTG
CGCGATGCCT TGCGTGCCGA ACTGGACGAG GGCGGCCTGG CGCAACGCTT TCTGGCGGGC
AAGGTCAATT TCGCCACCTT GATGCCAATG CGGGCCATTC CGTTCCGCGA GGTGTATCTG
CTGGGCATGA ACGACGGCGA TTATCCGCGT GTGCGCCAAC CCCAGGACTT CGACCTGATG
GCCACGCGGC CGCGTCCCGG TGACAGGTCG CGGCGCGACG ACGACCGCTA CCTGATGCTC
GAGGCCATGC TGTCGGCGCG CGCCAAGCTG ACGCTTTCCT GGGTGGGGCA CGATGTGCGC
GACAACACGC CGCGTCCGCC CTCGGTGCTG ATCGGCGAGT TGCTCGATAC CCTCGAGCAG
GGGTGGGACG TCCCCGAGGA CGGCGCCGGT TCGCGTGACG CGCGGCTGGC ACGCCGGCTG
ATCGAGACGC ACCCGTTGCA GCCCTTCTCG CGCCGCTACT TCGAACGCGA CGATCCACGT
TTCACCTACG AGGCGAGCTG GGAAGCCTTG TACGCGACGC CTGAAGACAC CGCCGCGGCG
ACGGCGGACG GCGCCCCCTC GCCGGATGCC TCGATGGCAT CGCTGCCTGA CGAGCCCTTG
TCGCTGGGCG ACCTGCAACG CGTGCTGCGC CGCCCGTGGA CGGTCTATCT CGGGCGCCTG
GGGGTTCATT ACGTCGATCC CCACGTCCCC GACGAGGACA ACGAGCCCTT CGCGCTGGAC
GGCCTCGAGG ACCATGGGCT CAAGCGCGAG CTGCTCGACG GCGCGCGCGG GGGCGTGGCA
CTCGCCAGCG TCGCCGAGCG GCTGCGCCTG GCCGGCCGCC TGCCAACGGC GGGCTTCGGC
GAGGCCTTGA TCGAGCCGCG TCTGGCCCGT TTGTCGCGCC AGGTGGAAAG CTGGCGTCGC
GATGTGGCCG CCTGCACTGC CGCCTCGCCG TTTCTCGCCC GCTTCCAGGG GGGCGCGTCG
GCGCTGACGC TGGAGGCACG CCTCGACGAC GTGTTCGCCG CGCCGGAGGA TGGCGCCGCG
CCCTGGTGCC TGATGACGCT GGAGCCCGGG CATTACGGCC ACTTGAAGGT CGAAGGCACG
GGGCCGCACC GACACGTCGG CAAGGTGCAT CGACTCTACG GCGGGTATCT GCGCTGGCTG
CTCGCCAATG CCACGCTGGA GGCACCCTGC AGCTGGACGG CGGTCTTCGA GGATCGTTGC
CTGAGCTTGC CGGGAATGGC CGCCGCCACG GCGCGACAGC AGCTCGCGAC CTGGCTGGAC
GCCTGGGCGC GTGCCTACCG CATGCCCTGG CCGGCGATCG GCGAGGTGGC ACAAGAGATC
TGGAAACGCG TGCCGCGCGA GACCTGCGAG GCCCTGCAGG CCGGGGAGCC GCTGGAGAGC
GGCCTGCGCG AGGCGCTGAT CGCACGTTAC GAAACCGATG CCTATGCCGG TCCGGCGGCC
CTGAGGGCAC GCGACGGCGC CCTGGGACAG CTGTGGCCCG ATTTCGCCGC CTTCGAGGCG
GCAGGGGGCG TCGCGGCCTC GCTGACGCTC TACGCGCCCT TGCTAGACAT GCTGGCGCAG
GTGACCCAGC GAGTACATGG AGGACGCGCA TGA
 
Protein sequence
MFSVIHANHL EDLGTLALDV IRRHRQPPLV PETFLVQSNG MAQWLRLTLA EADGIAASVD 
FPLPSSFVWR AYRAVLGDDI PEQSPFDKTP LAWRLMALLE RCLDPETSPD DPTCYAPLRD
YLQGEALEAS PLPGAAEEAR ERRRWHLAVR LADLFDQYLI YRPEWIEAWE RGEHAPADLP
DDQRWQPALW RALIEDAPAA AREHHRARLH RRFLDAARGL RKRPRDVPPR VFVFGISALP
AQTLEALHAL SGVVDVFLMI ANPCRHYWGD IVSDRDAIKR AGRLSSQARR EQEARHPEAP
WLAELDEEAL HLHANPLLAG WGTQGRDFIV GLYEFESDRG FDLETDVFRD MAPEQSPTLL
QQLQQDVLEL VHPGERARRE GGPRRIAEDD ESLSLVSAHS PLREVEILHD RLLAAFERAE
AAGQPLRPRD IIVMVPDIDR YAPCIEAVFG QLPPSHPRHI PFTIADQVAS EAHPLMALAL
LLLELPERRL TVSEVLDALE VPAFRTAFAI DEAELERLRQ WLAGSGVRWG LSAEHRDSLG
FPALGENSWR FGLSRMLLGY AVGEPSAGGA RDDSEDSLGH APSGDFQGIV PYAEVGGLEA
DLAGRVATLL STLEQQCAAL GERLTPMAWL GRLQALFAAC LQPGTADEHD VMARLDAALA
RWAQQCRHAD FEEPVGLGVV RDALRAELDE GGLAQRFLAG KVNFATLMPM RAIPFREVYL
LGMNDGDYPR VRQPQDFDLM ATRPRPGDRS RRDDDRYLML EAMLSARAKL TLSWVGHDVR
DNTPRPPSVL IGELLDTLEQ GWDVPEDGAG SRDARLARRL IETHPLQPFS RRYFERDDPR
FTYEASWEAL YATPEDTAAA TADGAPSPDA SMASLPDEPL SLGDLQRVLR RPWTVYLGRL
GVHYVDPHVP DEDNEPFALD GLEDHGLKRE LLDGARGGVA LASVAERLRL AGRLPTAGFG
EALIEPRLAR LSRQVESWRR DVAACTAASP FLARFQGGAS ALTLEARLDD VFAAPEDGAA
PWCLMTLEPG HYGHLKVEGT GPHRHVGKVH RLYGGYLRWL LANATLEAPC SWTAVFEDRC
LSLPGMAAAT ARQQLATWLD AWARAYRMPW PAIGEVAQEI WKRVPRETCE ALQAGEPLES
GLREALIARY ETDAYAGPAA LRARDGALGQ LWPDFAAFEA AGGVAASLTL YAPLLDMLAQ
VTQRVHGGRA