Gene Csal_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1152 
Symbol 
ID4027717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1319642 
End bp1321120 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content68% 
IMG OID637966329 
ProductGntR family transcriptional regulator 
Protein accessionYP_573207 
Protein GI92113279 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGATC CGAATGCTCA CCGTCTCTGG ATTCAGGAGG CACTGAATCT TCAACTGGCC 
GAGCCGGATG TCCGTACGCT CGGCCAGCGC CTTTACGACG CCCTGCGCGG CGGCATCCAG
CAGGGCCGGC TCCCTCCGGG GAGTGCACTG CCCTCGTCCC GTCAACTGGC GACCGAGCTC
GGCATCGGGC GCAACACGGT GCTGAGTGCG GTCGACCGCC TCGTCGCCGA AGGCTTCCTG
GTGTCGCGTC CCGGCGCCGG GGTCTTCATT GCCGACTGGC AGCGGGGTCC CCAGACGCCC
CTCGATGTCC CTTCCTCGAC GCCCGTGACG CTCTCGCGTC GTGGCGAACG CCTGCTCGAT
TTCACGGCGC CCCCGAGCGC ACGTCATGCG GTCTTCGCGC CGGGCGTGCC GGCGCTGGAT
CGTTTTCCTC GCGAGCGCTG GCAACGCTTG CTGCGCCGTC ATCAGCAACG CGCCCCCATC
GACTGGTTCG ATTACCGGAA TGAAGGCGGC GTGAAGGCAC TGCGCGAGGC ACTGTGCGAC
TACTTGCGTT TATCGCGTTC GGTGCGCTGC CGGCCGGAAC AGGTCCTGAT CACCCAGGGT
GCGCAACAGG GCTTCGAGCT GATCGCGCGC CTGCTCGCCG ATGTCGGGGA TGACGTCTGG
CTGGAGGAGC CGGGCTACGG CGGTGCGCAG GCCTGCTTCG CCGCCGCAGG CCTGAGCCTG
CAACCGGTGC CGGTCGACGA CGAGGGCCTG AACGTCGCGT CGCTGCCCCC CGAGACGCCC
TCCCCCAAAC TGATCTACGT GACACCGTCG CACCAGTACC CCAGCGGCGC GACCCTGTCG
CTGGCGCGCC GCACGGCACT GCTGGGGCTT GCCCAGCAGC ATGGCGCCTG GATCATCGAG
GACGACTACG ACAGCGAGTT CCGCTATACC AGCGCGCCCA TCGCCTCGCT CCAGGGGCTG
ATGGACAACG CCCCGGTAAT CTATGTCGGC ACCTTCAGCA AGGTCCTTTA TCCAGGGCTG
CGGCTGGGGT ATCTGGTGCT GCCGCCGTCA CTGGTGACGA GCTTTCAGCG CATCAACGCC
CGTCTGCACC GGGAAGGGCA GTACGTGACC CAGGCGGCGC TTGCCGACTT CATCGGCGAA
GGCCATTTCG CGCGCCACGT CGCCCGCATG CGCCAGTGCT ACCGGGCGCG GCAGGCCACG
CTGCGACGCG CCCTGGCGCC GGCAGTGGCA CACGGGCTCG AACTCTCGTC CGGCCATGCG
GGAATGCATC TGGTCGCCTA CCTGGCAAGC CACGACCTGG AACGCGAGCT GATCCGTCGT
GGAGAGCAGG CAGGCCTGCG GCTGTCGCCG CTTTCCGACC ATTATCTGCA GGCCCCCGGC
CGGCCAGGCC TCGTTCTCGG CTACGCCGGT GCCCCGGAAG CCGAGATCGA GCGCGCCGGA
CGCTGGCTCG GCGAGCACTG GCTGGCACTG ACGACCTAA
 
Protein sequence
MADPNAHRLW IQEALNLQLA EPDVRTLGQR LYDALRGGIQ QGRLPPGSAL PSSRQLATEL 
GIGRNTVLSA VDRLVAEGFL VSRPGAGVFI ADWQRGPQTP LDVPSSTPVT LSRRGERLLD
FTAPPSARHA VFAPGVPALD RFPRERWQRL LRRHQQRAPI DWFDYRNEGG VKALREALCD
YLRLSRSVRC RPEQVLITQG AQQGFELIAR LLADVGDDVW LEEPGYGGAQ ACFAAAGLSL
QPVPVDDEGL NVASLPPETP SPKLIYVTPS HQYPSGATLS LARRTALLGL AQQHGAWIIE
DDYDSEFRYT SAPIASLQGL MDNAPVIYVG TFSKVLYPGL RLGYLVLPPS LVTSFQRINA
RLHREGQYVT QAALADFIGE GHFARHVARM RQCYRARQAT LRRALAPAVA HGLELSSGHA
GMHLVAYLAS HDLERELIRR GEQAGLRLSP LSDHYLQAPG RPGLVLGYAG APEAEIERAG
RWLGEHWLAL TT