Gene Csal_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1116 
Symbol 
ID4029054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp1269682 
End bp1270050 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content65% 
IMG OID637966293 
Productassimilatory nitrite reductase (NAD(P)H) small subunit 
Protein accessionYP_573171 
Protein GI92113243 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID[TIGR02378] nitrite reductase [NAD(P)H], small subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.491497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTACCG CAACCGCAAT TCCCCCAACC CCGACCCGGA CCTGGCAGAC GCTGTGTGCG 
AGGGACGATC TGGTGGCCCA TTCCGGCGTG GCCGCCTGGC TGGAAGGCAC CGACACGCAA 
GTCGCGCTTC TGTACCTGCC CGGCCGGACG CCCGAGATCT ACGCCGTGGA CAACCACGAT 
CCGTTCTCCA ACGCCAACGT GATCGCCCGC GGCATCGTCG GCGACATAAA GGGCGAGCCG 
GTCATCGCCT CGCCGCTCTA CAAGCAGCAC TTCCGCTTGA ACGACGGCGT CTGCGTCGAG 
GACGAAAGCG TCCACCTGCG CACCTGGGAG GTCAAGATCG ACGGCGATCG GGTCATGATC 
AGGGTCTGA
 
Protein sequence
MSTATAIPPT PTRTWQTLCA RDDLVAHSGV AAWLEGTDTQ VALLYLPGRT PEIYAVDNHD 
PFSNANVIAR GIVGDIKGEP VIASPLYKQH FRLNDGVCVE DESVHLRTWE VKIDGDRVMI 
RV