| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1098 |
|---|
| Symbol | |
|---|
| ID | 4028020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 1244671 |
|---|
| End bp | 1245285 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637966275 |
|---|
| Product | sigma-24 (FecI-like) |
|---|
| Protein accession | YP_573153 |
|---|
| Protein GI | 92113225 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATG CCTCAAGACG CTCTCCAGGG CGCTCCTCGA TAGCGGCGGA TGACGCCTCC
GCCACGCCCG CCCCCGCAGG AGAGCGTCTG CCCGATCTGC TTCTGCGCGT GGCCCAACGC
GATCGCCGCG CCTTCACGCA GTTGTACGCG GCCACGTCGG CGAAACTCCA TGGCACGGTA
CTGCGTATCT TGAAGGAGAG GGGCCGGGCC GACGACGTGG TTCAGGAGGC CTACGTCACG
ATCTGGCAGA AGGCGGCACA GTTCGACGCC GAGCGTGCCT CGCCCATTGC CTGGATGGTC
GCCATCGCCC GCCATGCCGC CATCGACGAG CTGCGCCGCC GGCCTCGGGC TCCTCACGAG
CCGGAAGAGG CGTTGGCCCA CACGCCCGCC GACGGGCCCA GCGCCCATGA GCACCTGGAA
TACGAGCAGG ACGCCAAGCG GCTGCATGCG TGCCTGGAAG CGCTCGAGGC CGAGCGCCGG
GACATGGTCC GCCTCGCGTA CCTGGACGGC TGGTCGCGCG CCGATCTGGC CACGCATTTC
GAGCAGCCGG TGAATACCGT CAAGACCTGG CTCCATCGGG CCTTGAAGCA ACTCAAGGGG
TGCCTGGCAC CATGA
|
|---|
| Protein sequence | MSDASRRSPG RSSIAADDAS ATPAPAGERL PDLLLRVAQR DRRAFTQLYA ATSAKLHGTV
LRILKERGRA DDVVQEAYVT IWQKAAQFDA ERASPIAWMV AIARHAAIDE LRRRPRAPHE
PEEALAHTPA DGPSAHEHLE YEQDAKRLHA CLEALEAERR DMVRLAYLDG WSRADLATHF
EQPVNTVKTW LHRALKQLKG CLAP
|
|---|
| |