Gene Csal_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1088 
Symbol 
ID4028010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1230174 
End bp1230914 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content40% 
IMG OID637966265 
Producthypothetical protein 
Protein accessionYP_573143 
Protein GI92113215 
COG category[S] Function unknown 
COG ID[COG3403] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGTG TATCCAATAG GTTGATTGAG CAATCTGATA TAGAAAATAT GCCAAACACA 
TGGAAGAAAC AAGCTTATAG GCAAATAGCT AAAAAGCTGG GACCAAAGTC AAACTTCCCA
TGTATATTTT CTAAAAACGC CTATAAAAAG GGCTTACTAC AGTTCGTATT TATGGAAAGC
ATATCTCACG ATCAAATGGA GGAATTAAAG GTCTGCTTAA CAGAATTCAT AGAAGCTAAC
AAGGAATGGG ATCATAGAAT TAGCACGGCC AAACCATTAC TAATTGTGTT TTCCACACAA
GCAATTAAGT CAGAAAGACT TGAGGACTAC CACTCATTTG GCTGGAACGT TCTAAGAAGC
ATACATGCTT TAGATCCGTC GCCTTGGCCT CATGGCGTGG ACAAAGACCC AAGTTCACCG
AATTGGTCAA TGTGCTTTAA TGGCATGCAA TTGTTCATCA ACATGAGCTG CCCTGCTCAT
AAAGTTAGAA GAAGCCGAAA CCTTGGCGAT CACTTTATTA TGGTCGTAAA TCCAAGGGAA
AGGTTTGATG TAGTTGCAGG AGACAACGCA AAAGGCCATA GGGTAAGAGA CGAAATCAGG
GGAAGGATTG AGATTTACGA CAACTGTAAA CCTTGTAAGC AGTTAGGTTA TTTTGGCTCT
GACACAATGG AATGGCAGCA GTATGGAATA ATTGAAGAAA ATAAGACGCG AACATCCAAA
TGCCCTTATA AAATTGATTA A
 
Protein sequence
MQRVSNRLIE QSDIENMPNT WKKQAYRQIA KKLGPKSNFP CIFSKNAYKK GLLQFVFMES 
ISHDQMEELK VCLTEFIEAN KEWDHRISTA KPLLIVFSTQ AIKSERLEDY HSFGWNVLRS
IHALDPSPWP HGVDKDPSSP NWSMCFNGMQ LFINMSCPAH KVRRSRNLGD HFIMVVNPRE
RFDVVAGDNA KGHRVRDEIR GRIEIYDNCK PCKQLGYFGS DTMEWQQYGI IEENKTRTSK
CPYKID