Gene Csal_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1060 
Symbol 
ID4027849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1199059 
End bp1199751 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content57% 
IMG OID637966238 
Producttwo component transcriptional regulator 
Protein accessionYP_573116 
Protein GI92113188 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATCG CCATTCTCGA AGACGACCCC GATCAGCAGG ATCTGATTGC TGCGGCTCTG 
AGCAACGTGT CAGCCACGCT GACACCGTTT ACCACGGCTC ACGATCTGTT TCGGGCCATG
CAGAACAAAA GCTTCGAGCT GCTGGTGCTC GACTGGCGTT TGCCCGAGGT CGATGGGTTC
GAAGTGCTTG AGGCCCTACG CAATGAGTAT CAGTGGCCAG GTGCGGTGCT GTTCATTACC
GCCGACGATG CCGAAGACAA CGTCGTCCGG GCCCTAGAGG CCGGGGCAGA TGATTTCCTT
CATAAGCCTC TGCGGGTCAC CGAACTAAGG GCTCGAATCG AAGCCTTGGG TCGCCGGTTA
GGTTACGTCG ACAAAGATGG GACGACGTTG CTAGAGTGCG GCCTCCTCCA GCTCGACCTG
GCAGCTGGGT ACATCCGCCT CAATGGCGAG ACCGTCGAGC TTACGGATCG GGAATATCGG
CTAGCCGCCC TGTTTCTCCA GAACCCTGGC CAACTCTTCA CGCGCTCCTA TCTGCTTGAG
CGCATCTGGG GCGTCAGTGG TGCCCTCAAT ACTCGTACTG TCGATACCCA TATCAGTGGC
CTTCGGCGCA AGCTGAAGCT GGACGGACAA CATAATTATC GACTCAAGAG CGTCTATCAG
CAAGGCTACC GCCTTGAAGC AAACCATCTC TAA
 
Protein sequence
MRIAILEDDP DQQDLIAAAL SNVSATLTPF TTAHDLFRAM QNKSFELLVL DWRLPEVDGF 
EVLEALRNEY QWPGAVLFIT ADDAEDNVVR ALEAGADDFL HKPLRVTELR ARIEALGRRL
GYVDKDGTTL LECGLLQLDL AAGYIRLNGE TVELTDREYR LAALFLQNPG QLFTRSYLLE
RIWGVSGALN TRTVDTHISG LRRKLKLDGQ HNYRLKSVYQ QGYRLEANHL