Gene Csal_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1045 
Symbol 
ID4027833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1176552 
End bp1178651 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content60% 
IMG OID637966222 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_573101 
Protein GI92113173 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.616371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGTT CCCGTCCCTC GCCCCTGCCT TTCAACGTGC TGTCGTCGCC GGCTCGCCGC 
ATGGCGATGG CGACGCTGCT GCTCGGCTGC CCGCTAGCGG CGCAGGCACA AGACGACGTC
GCCCAGAGCG ATACCGTGGT CGTGACCGCG ACGGCGCTGA AGGTTGCCAC GCCGCCCATG
GAAACCCCGC GTGCCGTGTC CCAGGTGGGA CGTGAAGAAC TCGACAAGCG TGCCGTCAAT
AGTTACGACG AGACCTTCCG CTACCGCAGC GGGGTGCAGT CGGCACCTTA TGGCAGTGAC
AACGGCGTCG ACTGGTTCAA CATTCGCGGT TTCAGCGGCG AGGATTCGAC TTATCAGGAT
GGATTGCGCC TTTTCCGCGA GGGCGGCTAT TTCTGGTGGG TGACCGAGCC CTTCGGCCTC
GAACGTGTCG ATCTGCTCAA GGGGCCAGCC TCGATTCTTT ACGGTGAAGC GCCTCCCGGC
GGTGTGGTGA ACGCGATCAG CAAGCGGCCC ACCGAAGAAG CGCAAGGGCT GTTCGAGATC
CAGGGGGGTA ACAAGGATCA TCGTCAGGTC GGTATCGATA CCTCCGGTCC GGTCGCCGGC
ACCGACGACA TGCGCTATCG CATGGTGGGG CTCTTTCGCG AGGGCGATGG AGAGCTGGAT
CACACCGACA ATCAGCGAGT GTATCTGGCA CCGAGCCTGG CGGTGGATCT TTCCGACGCC
ACCACCGTGA CCTTTCTGGC CAGCTACATG AAGGATCATG GTACGCCCAG CAAGGGCTTT
CGACCGGTGG CGGGCTCGCT GGAGGGCACC GAGTTCGGGC ATATCGGCCG CGAGACCAAC
CTGGGAGAAC CGGATTACGA GCGTCAGGAA CGCGAGCAGA TTTCCCTGGG CTATGAGCTC
GAGCATGATA TCGACGAGAC CTGGCAGTTC CAGCAGAATC TGCGCTACAA CAGCATGGAC
TTGCTACTTC GCTCGCTCTC TCCTTTTACC GCGCTCAATC CGGACGGCCG CACGGTGGGC
CGTTACTTGA CGTATCGCGA TGGTAGCTAC GATTCCTTTA CCGTGGACAA TCGCCTGGTA
GGCAAGTGGT TTACCGCGAA TACTGAAAAT ACGCTGTTGC TGGGGGTCGA TTACCAGCAC
TTCGATGTCG ATTATCAAAA CGGTGATGGC ACGGGGGACT TCTCGGGTTT CGATGTGTTC
GATCCGGAGT ATGGCAACTA TTCGCCAGGC ACCTTGCAGT ACCAAGCCGA AGAGAAAAAG
GAGCAGATCG GCGTCTACAT CCAGGATCAG TTGCGCCTGG GAGACCGCTG GATTCTGCTG
GGTGGCGTGC GTCACGACTC GGCTAGCGTG GAAAGCTACA GCGACGCTCC CAACGCGTCG
GATTATGATG AAACCGAGAA CCAGCTGTCG TTCAGCGGCG GCGTGATGTA TCTCGGCGAT
TATGGTGTCT CGCCTTATCT AAGCTACAGC GAATCATTCA GCCCGCAAGT CGGGCGCGGG
CCGGATGGTC AGGCCTACGA ACCCAGCGAG GGTGAGCAAT GGGAAGCCGG GGTCAAGTAC
ACGCCCGATT GGCTGGATGG TTACATGACC GCCGCCGTGT TCGACCTCAA GGAAACCAAT
ACCCTGTATA CGGATGCGCA GTTCATTCAG TCGCAAGGCG GTGAACGTCA TTCACAAGGT
TTCGAGCTGG AAGGTGTTGG CTATCTGACC GAACAGCTCC AGCTGACGGC TTCTTACACT
TACCTGGATA CGACTATCGA AGATCCCGAG CGTGGGGAGT TCCGTGCCGG CTTGACGCCG
CGTCACCAGG CCTCGCTATG GCTGGATTAC GGCTTTGAGA GTGGTGCCCT GCAAGGGCTG
GATGTCGGTG CCGGGGCGCG TTATGTGGGC GAGAGCGTCA ATGCCGCTCC CGATCGTGAC
GATGAAGTCT CTTCCTATAC CGTGTACGAC GCCATGGCCA GCTACGAGAT CAACTCTGCG
TGGACGGCAC AGGTCAATGT CACCAACCTG ACGGACAAGG AGTACATCCG CGGGTGCGAC
TCCTGGTGCT ACTACGGCGA GTCACGCAGC GTGATCGGTA GTCTCAAGTA CCGTTGGTAA
 
Protein sequence
MSRSRPSPLP FNVLSSPARR MAMATLLLGC PLAAQAQDDV AQSDTVVVTA TALKVATPPM 
ETPRAVSQVG REELDKRAVN SYDETFRYRS GVQSAPYGSD NGVDWFNIRG FSGEDSTYQD
GLRLFREGGY FWWVTEPFGL ERVDLLKGPA SILYGEAPPG GVVNAISKRP TEEAQGLFEI
QGGNKDHRQV GIDTSGPVAG TDDMRYRMVG LFREGDGELD HTDNQRVYLA PSLAVDLSDA
TTVTFLASYM KDHGTPSKGF RPVAGSLEGT EFGHIGRETN LGEPDYERQE REQISLGYEL
EHDIDETWQF QQNLRYNSMD LLLRSLSPFT ALNPDGRTVG RYLTYRDGSY DSFTVDNRLV
GKWFTANTEN TLLLGVDYQH FDVDYQNGDG TGDFSGFDVF DPEYGNYSPG TLQYQAEEKK
EQIGVYIQDQ LRLGDRWILL GGVRHDSASV ESYSDAPNAS DYDETENQLS FSGGVMYLGD
YGVSPYLSYS ESFSPQVGRG PDGQAYEPSE GEQWEAGVKY TPDWLDGYMT AAVFDLKETN
TLYTDAQFIQ SQGGERHSQG FELEGVGYLT EQLQLTASYT YLDTTIEDPE RGEFRAGLTP
RHQASLWLDY GFESGALQGL DVGAGARYVG ESVNAAPDRD DEVSSYTVYD AMASYEINSA
WTAQVNVTNL TDKEYIRGCD SWCYYGESRS VIGSLKYRW