Gene Csal_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1039 
Symbol 
ID4027810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1168165 
End bp1169838 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content65% 
IMG OID637966216 
Productmultidrug transporter membrane component/ATP-binding component 
Protein accessionYP_573095 
Protein GI92113167 
COG category[P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4615] ABC-type siderophore export system, fused ATPase and permease components 
TIGRFAM ID[TIGR01194] cyclic peptide transporter 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAT TGCGCGTCGT GTATCGCGAC TATCGCTGGC CGTTCATCGG CGTCATGGTG 
CTGAGCCTGG CCAGCGCCGG ATTGGGCATC GGCGTCATCG CGTTCATCAA CCAGCACCTG
ATCGAGGCCC AGGGCGCTCC GCAGTGGGTG TTGCCGCAGT TCCTGGGGCT GATCGCCCTG
TTGCTGGCGG TGACGCTCGG CTCGCAGCTG GCGCTGACCA CCCTGGGCCA TCACTTCGTC
TATCGGCTGC GCGGGCGGTT GATCAAGCGC ATTCTGGATA CCGATATCGA GCGCATCGAG
CGGCTGGGCA GCGCGCATCT GCTGGCGAGC CTGTCGAGCG ACGTACGCAA TATCACCATC
GCCTTCGTAC GGCTGCCCGA GCTGGTGCAG GGCGTGATCC TGACGCTGGG CTCGGCCGCG
TACCTGGCCT GGCTCTCGCC GGGCATGCTG CTGATCACCT CGCTGTGGGT GGCGGTGACA
GTCGTCGGCG GCTGGTACCT GGTTTCGCAT GTGTATCGCC ATCTGGGACG CGTGCGCGAA
ACCGAGGATC GCCTCTACAA GGACTACGAG GCGGTGATCG ATGGCCGCAA GGAACTGGCC
CTCAACCGCG ACCGCGCCAG GGCGCTCTAC GAGGATGTCT ACGAGCACGA TGCCAAGCAG
TATCGTCATC ACATCATCCG CTCGGACACC TTCCATCTCA GCGCGGTGAA CTGGTCGAAC
ATCATGATGC TGGGGGCCAT CGGGCTGGTG TTCTTCCTCG CCAATGGCCT GGGATGGGCT
AATACCAACG TGGCGGCCAC CTACTCGCTG ACCCTGCTGT TCCTGCGCAC GCCGCTGATT
CAAGCCGTCG GGGCGCTGCC CACCCTGCTG AGTGCCCAGG TCGCCTTCAA CAAGCTCAAG
GACCTGGAGC TGGCCGGTTA TCGCGCCGAG TTCGGCGACA GTGCCGCGCA TGGCGATTGG
CAGACCCTGG AGCTGCGCGG CGTGACCTTC GCCTATGCCG CTGGCGAGCA TGGCCGCGGC
TTCGAAGTCG GCCCTGTCGA TCTGACGCTG TCGCGTGGCG AGCTGGTCTT CTTGATCGGC
GGCAACGGCA GCGGGAAGTC GACGCTGGCA CGCCTGCTGA CGGGCCTTTA TCAACCGGCC
AGCGGCGACA TACTGATCGA CGGGCAGCCC GTCGACGCAG AAGGGTGGCA CGCCTTCCGC
AGTCGTTTCG CGGCCGTGTT CACCGACTTC CATCTCTTCG ATCGCGTGAT GGGACCGGGA
GGCGAGACGC CCGACACGAC ATTGGCGGAG AGCTGGATCG AGCGCCTGGG CATGGGCGAG
AAGCTGCATT TCGACGGCTG GCGGGTGACC AACACCCAGC TTTCCCAGGG GCAGCGCAAG
CGCCTGGCAC TGCTGCTGGC GGTTGCCGAA CAGCGCGACA TCCTGCTGCT CGACGAATGG
GCGGCGGACC AGGATCCGCA GTTCCGGCGC ATCTTCTATC GCGAACTGCT GCCCATGTTG
CGCGACAGCG GCAAGACCGT GTTCGCCATC AGTCATGACG ATCACTACTT CCAGCACGCC
GACCGCTTGC TGGAGATGCG CGCGGGCCAG TTGAGCGAAC TGACCGGCGA GATGCGCGAG
CGTGTCAGCC GCGACGCCGT GGCACGGCTC GAGGACACAT CGGACAACGT GTGA
 
Protein sequence
MELLRVVYRD YRWPFIGVMV LSLASAGLGI GVIAFINQHL IEAQGAPQWV LPQFLGLIAL 
LLAVTLGSQL ALTTLGHHFV YRLRGRLIKR ILDTDIERIE RLGSAHLLAS LSSDVRNITI
AFVRLPELVQ GVILTLGSAA YLAWLSPGML LITSLWVAVT VVGGWYLVSH VYRHLGRVRE
TEDRLYKDYE AVIDGRKELA LNRDRARALY EDVYEHDAKQ YRHHIIRSDT FHLSAVNWSN
IMMLGAIGLV FFLANGLGWA NTNVAATYSL TLLFLRTPLI QAVGALPTLL SAQVAFNKLK
DLELAGYRAE FGDSAAHGDW QTLELRGVTF AYAAGEHGRG FEVGPVDLTL SRGELVFLIG
GNGSGKSTLA RLLTGLYQPA SGDILIDGQP VDAEGWHAFR SRFAAVFTDF HLFDRVMGPG
GETPDTTLAE SWIERLGMGE KLHFDGWRVT NTQLSQGQRK RLALLLAVAE QRDILLLDEW
AADQDPQFRR IFYRELLPML RDSGKTVFAI SHDDHYFQHA DRLLEMRAGQ LSELTGEMRE
RVSRDAVARL EDTSDNV