Gene Csal_1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1014 
Symbol 
ID4027860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1143714 
End bp1145267 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content64% 
IMG OID637966191 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_573070 
Protein GI92113142 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGG TCGATCGGCT CTTCGAACGC TACGGCCCCC GCTACCGCCT GTGGGTCACC 
CTGACCGTGA TGCTGGGACT CGTCGCCCTG GGCATGTCGA TCACCATCGT CAATGTGGCG
GTGCCTTACA TAAAAGGCGC GTTCGGCATG AGCGATTCCC AGGTGCAGTG GCTATCGACC
GGCTTTCTGG CCTCGACGAC CGTCTCGCTG CTCGTCGCGC CGTGGCTGGT CTCCGCCGTC
GGTCAGCGCG CCACCTTCAT TGGCTTGCTG GTCGTGTTCA TCGCCGCCTC GTTTCTCGGG
GGCCTAGGGC AAGGCATGGG CATGCTCGTC GCCGCGCGCG TCATACAGGG CGGTATGACG
GGTCTGATCC GCCCGGTGGC GATGCAGGCG CTATTCGCGG CTTACCCGCC CGAGGGACGT
GGCATGGCGA CGGCGATGTA CGGCATGTGT CTGGGGCTAC CGCTGACGCT GGCCACGGTG
ATCGGCGGCT GGCTGGTCGA GCATTTTACC TGGCGCTACG TCTTCTTCGT GACCCTGCCG
ATCTGCGTGG CGGCGGCGGC GATGGGGTAT TTCTTCTTGC CCTCGAGGGA GCAGAAGGGC
CCGCGCCCGC CCTTCGACTG GGCCGGCGTC GTGCTGTTAT TCGTCTCGGT TTTCTCACTA
CTCGCGGCGT TTTCCAACGG CCAGCGCTGG GGCTGGTACG ATCCTCGCGT GCCGGGCCTG
CTCCTCGTCG CCCTCGTCTG TGGCGCCGCG TTCGTGGTCT GGCAGAACCG CACCGCGCAC
CCATTGATAG ACTTGGCGAT TTTCCGCAAT CGCGTGTTCG TGGCCGGCAC TCTGGCAATG
TTCCTGTTCG GTGGCACCTT CTACGGCATC ATGTATTTGC TGCCTCAATT CGTGCAGTCG
GTGCTGCATT ACAGTCCGAT CACCGCCGGA CAGATCTTCC TGCCCTCCAC CGTCGTACTG
GGGGTGCTGG TACCGCTGGT CGGCTGGCTG AGCGACCGCC ACCCACCGCA TCGGCTCACT
GTGCCGGGGC TGGGCTGCAC GATGTATGCG GTGTGGCTGA TGGCACAGAT GGACTGGAAC
ACCTCGTTCA CGTATCTGGC GACGGCGATG GGAATTCTGT CCATCGGGAT GGCCGCGTTC
CCGCCACCGA CACTTTCCAA CGCCATTGCC GGCCTCCCCC GGCATCTGAC CGGCCACGGC
TCCGGGGCGA TCAATTTCGC GTTGCAGCTA GGCGGCGCAC TGGGCACGGC CGCATTGGTC
ATTCTGCTCG ACCGACGAAC AGCCCAGCAC GGTCAAGAAC TCAATGCCGG GGTCAATGCC
GATAACGCGC TCGCCAACCT CCAACTCGAC AAACTCGCAG AGCTGGCCGG TCATCTGGGC
TCTTCCGCCA CCCAGCAAGG CGCCATGGGC GGGTATCTCA TGGAGCGCAT CGAGACGATC
TGGGCATCGA TCCTCGCTTA TCAAGACGGC TTCTGGGTGC TCACGGGTAG CCTGTTCATC
GTCGCGATTC CATCGCTGCT CCTCAGTCGC TGGCGCGCCA CGACACCCAG ATGA
 
Protein sequence
MTQVDRLFER YGPRYRLWVT LTVMLGLVAL GMSITIVNVA VPYIKGAFGM SDSQVQWLST 
GFLASTTVSL LVAPWLVSAV GQRATFIGLL VVFIAASFLG GLGQGMGMLV AARVIQGGMT
GLIRPVAMQA LFAAYPPEGR GMATAMYGMC LGLPLTLATV IGGWLVEHFT WRYVFFVTLP
ICVAAAAMGY FFLPSREQKG PRPPFDWAGV VLLFVSVFSL LAAFSNGQRW GWYDPRVPGL
LLVALVCGAA FVVWQNRTAH PLIDLAIFRN RVFVAGTLAM FLFGGTFYGI MYLLPQFVQS
VLHYSPITAG QIFLPSTVVL GVLVPLVGWL SDRHPPHRLT VPGLGCTMYA VWLMAQMDWN
TSFTYLATAM GILSIGMAAF PPPTLSNAIA GLPRHLTGHG SGAINFALQL GGALGTAALV
ILLDRRTAQH GQELNAGVNA DNALANLQLD KLAELAGHLG SSATQQGAMG GYLMERIETI
WASILAYQDG FWVLTGSLFI VAIPSLLLSR WRATTPR