Gene Csal_1009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1009 
Symbol 
ID4027855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp1138154 
End bp1138792 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content65% 
IMG OID637966186 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_573065 
Protein GI92113137 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTGA CGACGTGGCT CACTTATGTC GGCGTTATCG CCGCACTGAT CGCCTTTCCC 
GGTCCGGTGG CACTGTTATG CATGCACCAC GGGTTACGCC ATGGCCGTCA GCGCGCCTTG 
GCGACGGTGA TCGGCGGAGC CATGGCGTCG TTGGTGCTCA TGGGGCTCTC GTCGCTGGGG 
TTGGGCGCGA TTCTCGCCAC CTCGGAACTG GCCTTCATGC TGCTGAAGGG GCTGGGCGCG 
GCGTATCTGA TTTATCTTGG CATTCAGGCC TGGCGGGCGC CCGTGACGAC GTCGCCGACG 
GAGACGCCGT CGGCGAGTTC GGTGCAAGCC GGGCGTACCG GGCGGCTGGA GTTGTTTCGG 
CGCGGCTTTA CGGTGGGCAT CAGCAATCCC AAGGACCTGC TCTTCTTCGG CGCGCTGTTT 
CCCGGCTTCA TCGATCTCGG CGCCCCGCAA CTGCCCCAAT TCGCGATCCT GTCGCTGACC 
TGGCTGGCCA TCGACCTCAC CACCATGTCG AGCTACGCCA CGATGGGCTC GGGCATCGGA 
CGCTGGTTTC ATAGCCCGCG CCGTGTGAAG TTGTTCAACC GCACCACTGG CAGCTTGTTC 
ATTGCCGCCG GGGGCACCCT GGCGGCGTCG CATCGCTGA
 
Protein sequence
MELTTWLTYV GVIAALIAFP GPVALLCMHH GLRHGRQRAL ATVIGGAMAS LVLMGLSSLG 
LGAILATSEL AFMLLKGLGA AYLIYLGIQA WRAPVTTSPT ETPSASSVQA GRTGRLELFR 
RGFTVGISNP KDLLFFGALF PGFIDLGAPQ LPQFAILSLT WLAIDLTTMS SYATMGSGIG 
RWFHSPRRVK LFNRTTGSLF IAAGGTLAAS HR