Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0987 |
Symbol | |
ID | 4026210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 1107364 |
End bp | 1108491 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637966164 |
Product | transcriptional regulator |
Protein accession | YP_573043 |
Protein GI | 92113115 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTGA CGAGCGATCG CCTCGCGACG CCTGCCACCC CCAAGGCGCC CCTGCGTCTG GGTTTTCTGT TGATGGACAA TTTCACGTTG ATTTCGCTGG CCTCGGCGGT GGAGCCGTTG CGCATGGCCA ACCAGCTCGC CGGGCGCGAA CTCTACCAAT GGACCACCTT GAGCGCGGAC GGCGAGGCAG TACGTGCCAG CGACGGCTTG CTCATCACCC CCGACAACGG CATGCATGCC CCCCTGGAAC TCGACATGGT GTTCGTCTGC GGCGGCGTCG GCATTCAGCG CCATGTCACG CGTGAGCATG TGTTGTGGCT GCAGGCCCAG GCGCGCCAGT CGCGACGCAT CGGCGCCTTG TGTACCGGTA GCTGGGCGCT CGCCAAGGCG GGGCTGCTGG ATGGCTACGA GTGCAGCATT CACTGGGAGT TCCAGGCCGC CGCCCAGGAG GCTTACCCGC ACGCCACGCT GACCACGCGG TTGTTTTCCA TCGACCGCGA CCGGGCCACG GCCTCGGGCG GGACCGCACC GCTGGACATG ATGCTGACGC TGATTGCTCG CGATCATGGT CGCGAATTGT CGGCGGCGAT CTCCGACATG TTCATCTGCG ATCGTGTGCG CGGCGAGCAG GACCAGCAGC GCGTCCCGCT GCGTCATGTG CTGGGCACCA GTCAACCCAA GCTGCTCGAG ATCGTCGCGC TGATGGAAGC CAACCTGGAA GAGCCCATCG CTCTCGACGA GCTGGCGCGC TATGTGGACG TCTCCCGGCG TCAGCTGGAG CGCCTGTTCC AGAAATACCT GAGCTGCTCG CCGTCGCGTT ACTACCTCAA GTTGCGATTG ACCCGGGCCC GGCAGTTGCT CAGGCAAACC TCGATGTCGA TCATCGAAAT CGCATCGGTG TGCGGGTTCG TGTCCACGCC GCATTTCTCC AAGTGCTACC GCGAATATTT CGGGACACCG CCCCGCGACG AACGCGTGAC GCGCCTCAAC AGTGCCAGCG TGACGCTGGC GCCCGCTGCG CCGTCGGACG GGCACGACCC CTATGTCGCG CCGCGTGCCT CCAGTGCCAT GCAGGCGCTG GCCCAGGCGC AAGGCGAACC CACCTACGCC AGCGTACGCC TCGTGTAG
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Protein sequence | MTLTSDRLAT PATPKAPLRL GFLLMDNFTL ISLASAVEPL RMANQLAGRE LYQWTTLSAD GEAVRASDGL LITPDNGMHA PLELDMVFVC GGVGIQRHVT REHVLWLQAQ ARQSRRIGAL CTGSWALAKA GLLDGYECSI HWEFQAAAQE AYPHATLTTR LFSIDRDRAT ASGGTAPLDM MLTLIARDHG RELSAAISDM FICDRVRGEQ DQQRVPLRHV LGTSQPKLLE IVALMEANLE EPIALDELAR YVDVSRRQLE RLFQKYLSCS PSRYYLKLRL TRARQLLRQT SMSIIEIASV CGFVSTPHFS KCYREYFGTP PRDERVTRLN SASVTLAPAA PSDGHDPYVA PRASSAMQAL AQAQGEPTYA SVRLV
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