Gene Csal_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0987 
Symbol 
ID4026210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1107364 
End bp1108491 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content66% 
IMG OID637966164 
Producttranscriptional regulator 
Protein accessionYP_573043 
Protein GI92113115 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTGA CGAGCGATCG CCTCGCGACG CCTGCCACCC CCAAGGCGCC CCTGCGTCTG 
GGTTTTCTGT TGATGGACAA TTTCACGTTG ATTTCGCTGG CCTCGGCGGT GGAGCCGTTG
CGCATGGCCA ACCAGCTCGC CGGGCGCGAA CTCTACCAAT GGACCACCTT GAGCGCGGAC
GGCGAGGCAG TACGTGCCAG CGACGGCTTG CTCATCACCC CCGACAACGG CATGCATGCC
CCCCTGGAAC TCGACATGGT GTTCGTCTGC GGCGGCGTCG GCATTCAGCG CCATGTCACG
CGTGAGCATG TGTTGTGGCT GCAGGCCCAG GCGCGCCAGT CGCGACGCAT CGGCGCCTTG
TGTACCGGTA GCTGGGCGCT CGCCAAGGCG GGGCTGCTGG ATGGCTACGA GTGCAGCATT
CACTGGGAGT TCCAGGCCGC CGCCCAGGAG GCTTACCCGC ACGCCACGCT GACCACGCGG
TTGTTTTCCA TCGACCGCGA CCGGGCCACG GCCTCGGGCG GGACCGCACC GCTGGACATG
ATGCTGACGC TGATTGCTCG CGATCATGGT CGCGAATTGT CGGCGGCGAT CTCCGACATG
TTCATCTGCG ATCGTGTGCG CGGCGAGCAG GACCAGCAGC GCGTCCCGCT GCGTCATGTG
CTGGGCACCA GTCAACCCAA GCTGCTCGAG ATCGTCGCGC TGATGGAAGC CAACCTGGAA
GAGCCCATCG CTCTCGACGA GCTGGCGCGC TATGTGGACG TCTCCCGGCG TCAGCTGGAG
CGCCTGTTCC AGAAATACCT GAGCTGCTCG CCGTCGCGTT ACTACCTCAA GTTGCGATTG
ACCCGGGCCC GGCAGTTGCT CAGGCAAACC TCGATGTCGA TCATCGAAAT CGCATCGGTG
TGCGGGTTCG TGTCCACGCC GCATTTCTCC AAGTGCTACC GCGAATATTT CGGGACACCG
CCCCGCGACG AACGCGTGAC GCGCCTCAAC AGTGCCAGCG TGACGCTGGC GCCCGCTGCG
CCGTCGGACG GGCACGACCC CTATGTCGCG CCGCGTGCCT CCAGTGCCAT GCAGGCGCTG
GCCCAGGCGC AAGGCGAACC CACCTACGCC AGCGTACGCC TCGTGTAG
 
Protein sequence
MTLTSDRLAT PATPKAPLRL GFLLMDNFTL ISLASAVEPL RMANQLAGRE LYQWTTLSAD 
GEAVRASDGL LITPDNGMHA PLELDMVFVC GGVGIQRHVT REHVLWLQAQ ARQSRRIGAL
CTGSWALAKA GLLDGYECSI HWEFQAAAQE AYPHATLTTR LFSIDRDRAT ASGGTAPLDM
MLTLIARDHG RELSAAISDM FICDRVRGEQ DQQRVPLRHV LGTSQPKLLE IVALMEANLE
EPIALDELAR YVDVSRRQLE RLFQKYLSCS PSRYYLKLRL TRARQLLRQT SMSIIEIASV
CGFVSTPHFS KCYREYFGTP PRDERVTRLN SASVTLAPAA PSDGHDPYVA PRASSAMQAL
AQAQGEPTYA SVRLV