Gene Csal_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0960 
Symbol 
ID4026738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1079160 
End bp1080041 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content66% 
IMG OID637966137 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_573016 
Protein GI92113088 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.877538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCG GTTTCATTGG ACTGGGTGCC ATGGGACGTG GCATGGCGAG TCAGCTACTC 
GAGGCAGGGC ATGAGGTCAC GGTGTGGAAT CGCTCCACCG AAGCCGTCGA GGCCTTGACT
CGGAAAGGCG CCAAGGCAGC CAAGACGCCT GCGGATGCGG CGCGTCACGA GGTGCTGATC
AGCATGCTGG CAGACGATCA GGCGGCGCAT CAGGTACTGA TCGAGAGCAA GGCCGTCGAG
GCGATGAAAA AGGGCAGCGT GCATATCAAC ATGGCCACGG TGTCGGTGGC CTTTGCGCGT
GGCATGACGG CACTGCACGA CCGCCTGGGC GTGGCCTACA TCGCCGCGCC GGTGCTCGGA
CGTCCGGACG TGGCGGCAGC GGGCAAGCTC AACATCATCG CTGCCGGTGA TCCGGCCCAG
CTCGAGCGGG TCAGGTCCGT GCTCGACGCC ATGGGCCAAG CCGTATGGCC ATTGGGCGAG
TCGCCGGAGC GTGCCAACGT GGTCAAGATC GCGGCGAACT TCATGCTCGC CACCGCCATC
GAATCGATGG CCGAGGCCTC GACGCTGACA CGTGCATACG GCATCGAGGC CAGCGATTTT
CTCGATGTGG TCACCAATAC GCTCTTCGCC TCACCGGCCT ATCAGGGCTA TGGCAAGATG
ATCGCCGAAG CACGCTTCGA GCCCGCCGGC TTCACGATGC GCCTGGGCCA CAAGGATGTC
GGACTGGCCC TGCGTGCGGG AGACGAGCGG CATGTCGCCT TGCCGCTGGG TAGCGCGGTG
CGCGATCGGC TGCTCGATGC CCTGGCGCAC GGCGATGGCG AGAAGGACTG GTCGGGGCTC
GCCGAGGTGG CCGCGCGCCA GGCCCACCTG GACACGCGCT AG
 
Protein sequence
MKIGFIGLGA MGRGMASQLL EAGHEVTVWN RSTEAVEALT RKGAKAAKTP ADAARHEVLI 
SMLADDQAAH QVLIESKAVE AMKKGSVHIN MATVSVAFAR GMTALHDRLG VAYIAAPVLG
RPDVAAAGKL NIIAAGDPAQ LERVRSVLDA MGQAVWPLGE SPERANVVKI AANFMLATAI
ESMAEASTLT RAYGIEASDF LDVVTNTLFA SPAYQGYGKM IAEARFEPAG FTMRLGHKDV
GLALRAGDER HVALPLGSAV RDRLLDALAH GDGEKDWSGL AEVAARQAHL DTR