| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0939 |
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| Symbol | |
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| ID | 4026793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 1053571 |
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| End bp | 1054887 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637966116 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_572995 |
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| Protein GI | 92113067 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATAC CGGCCGCGAA GAATTTCTCC ACCTTCCCCA GCGAGTGCGA TGCATTGTTG
GCGACCTCTT CCGCCATTTT CTATGCGACC GGTCCCGGCT GGTGGCGCCA TGACCTGCAT
TACGTCAGCC ATAACGTCGC GCAGATGATC GACGCGTCAC GCGAGCGCCT GCGCGAAGCG
CCCGCGCTGT GGATGGAACG CATGCAGGAC GCCAGTGGTG TCGAGCAGCG TCTGTTCACG
GCTCTCGAGG CGGGCGAGTC GCGCATACGC TTGCGCTACC GGATGACGTG CGATGATGGC
AGCGAGCGCT ATCTGCAGGA CGATATCGCT GTCCACCGCG ACGCCGCAGG AGAGGTCGTG
GAGTTGGTCG GCGCCCTTGT CGACATTACC CGGCCCGACT CCGTCCAGGC ACGCCTCGAG
GCCCTTGCCG AAAGTGAGCG GCATTATCGC TTCATCGTCG AAAACGTCAG CGATGCCATC
GTGCTGATGG ATGCCGAGGG CGCGTGCCGT TTTGCCTCAC CGTCGATTCA AGACATTCTC
GGCCACCGTG CCGAGCGACT GCGTGGGCGC GGGCTGCTCG AATTGCTGCC CCCGGACGAT
GCGCCGCGCG TTCAACGTCT GATCCACGAC GCCTCGTTGC ACGGCGAACC GCTGCGCATG
GAATTGCGCA TGCGCCACCG ACTCGGCCAT TACGTGTGGC TGGAGACATG CTGCTCCCCC
TCTTTGAATG CCGACACTGG GCGGTACGAG TGGATTCTCG CCGTGGCGCG GGATATCACC
GATCGCAAGC ATCGCGAGTA CCGTCTGCAG GAACTGTCGA CCACCGACAG CCTGACCGGG
GCACTCAATC GTGGCGCCTA TCTGAGCTGC TTGCGCAGCG GGCTGGAAGC TGCCGATCAT
GTTGCCCAGC GCATGTCGCT GGTGATCTTC GATATCGACC ATTTCAAGAC GATCAACGAC
ACTTGGGGAC ATGCCGCCGG CGATCTGGTG CTGGCGTGCG TGGGGGAAAT ATGTCGCACG
GCGTTACGCG ATCAGGACGT CTTCGGGCGT ATCGGCGGCG AAGAGTTCTC GTTGATGCTG
GCCGGGCAGT CATTGAACGA CGCGGCGCTG CTCGCCGAGC GGTTGCGCAA GAAGTTCGAG
AGCGTGCGTG TCGAGTTCCA CGGTGAATGG CTGAGTTTCT CGGTCAGCTT CGGTGTGGCG
GAGCGCCAGA CCAGCGAGGG CGTGGAGTCC TTGTTGCACA GAGCCGACAT GGGGCTCTAT
GCCGCCAAGC GCAACGGTCG CAATCGGGTA CACCAGGCAC CGGCGCAAAC GGCGTAA
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| Protein sequence | MDIPAAKNFS TFPSECDALL ATSSAIFYAT GPGWWRHDLH YVSHNVAQMI DASRERLREA
PALWMERMQD ASGVEQRLFT ALEAGESRIR LRYRMTCDDG SERYLQDDIA VHRDAAGEVV
ELVGALVDIT RPDSVQARLE ALAESERHYR FIVENVSDAI VLMDAEGACR FASPSIQDIL
GHRAERLRGR GLLELLPPDD APRVQRLIHD ASLHGEPLRM ELRMRHRLGH YVWLETCCSP
SLNADTGRYE WILAVARDIT DRKHREYRLQ ELSTTDSLTG ALNRGAYLSC LRSGLEAADH
VAQRMSLVIF DIDHFKTIND TWGHAAGDLV LACVGEICRT ALRDQDVFGR IGGEEFSLML
AGQSLNDAAL LAERLRKKFE SVRVEFHGEW LSFSVSFGVA ERQTSEGVES LLHRADMGLY
AAKRNGRNRV HQAPAQTA
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