| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0918 |
|---|
| Symbol | |
|---|
| ID | 4027425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 1032549 |
|---|
| End bp | 1033856 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637966095 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_572974 |
|---|
| Protein GI | 92113046 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00205446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTGA GATCGTTCGC CTTTCTGGGC TTCATGCTGC TGGTGGCGAT GGCGCCATCG
ATGGCGTCGG CGCAGCCCCA GCCGCTGGAC CGCATCGTGG CGGTCGTCAA CAAGGATGCG
ATCATGCAGA GCCGGCTCGA GGATCGCGTC ACGCAGGTGC GCCGCCAAAT GGCGAGCCGC
AACGTTCCCG CGCCGAACGA GGCGGATCTG CGACGCCAGG TGCTCGACCG CATGATTCTC
GAGCAGATTC AGCTGCAGAT GGCCGAGCGC GCCAACTTGA GCATCGACGA TACCCAGCTC
AACGCGACCG TGCGGGGTAT CGCCGAGGAC AACGGCATGT CGATGGACGA GTTCGCCGAT
GCCCTCGAGG AAGATGGCAT GTCCCTGGCC TCGATGCGCG AGCAGGTGCG TCGCGAGATG
CTGTTGCGTC AGGTACAGCA GAGCCAGGTC GCGAGCCGCG TCAACGTCAC CGACCGCGAA
GTGGAACGTT ACCTCGATCA GCAAGGCGAG ACCGCCGATA CCGCGTATCA TCTCGCCCAC
ATTCTCGTCT CGGTGCCCGA GTCGCCCACG CCCGAGCAGG TCGAGCAGGC ACAGGCCAAG
GTGCGTGACT TGTATCGGCA GTTGCAGAAT GGCGCCAACT TCGCGCAGCT CGCGACGGCC
GAGTCCGACG GCCAGCAGGC GCTGTCGGGC GGCGACCTCG GGTGGCGGCG TGGCGATCAG
CTGCCCAGCC TGTTCGCCGA CGTGGTGCCC ACGCTATCCA ACGGCGAGGT CAGCGAGCCC
ATTCGCAGCC CCAGCGGCTT CCATCTGGTC AAGCTGATCG ATACGCGTGG CCAGCAGGGC
GAGCAGAAGC GCGTGGTCAC CGAGAACCGT GTGCGCCATA TCCTGATCGG CACCAACCCG
AACCGCAACG ATCAGCAGGC CGAAGCGCTG GCCCGCGACA TACGTCAGCG TATCGCCAAT
GGCGAGAGTT TCGCCGCGCT GGCACAGGAA TACAGCGACG ACGATGGCAG CGCCCTCGAC
GGCGGCGAGC TGGGCTGGAC GCGTCCCGGC CAGATGGTGC CGGCGTTCGA AGATGCCGTG
AAAGCGCTGG ATGTCGGTGA ACTGTCGCAG CCGGTACGTT CACGCTTCGG GTACCACGTG
ATCGAGCTCG AGGATCGGCG TCGTCAGGAC GTGACCCGCG ACGCGCAGCG CGAGCAGATT
CGTCAGACGC TGTTCCAGCG CAAGGTGAGC GACGAGATGG AAGCCTGGAC GCAGGAAATC
CGCTCCGGGG CCTATATCGA CAACCGCCTG GAAGACGGCC GCCAGTGA
|
|---|
| Protein sequence | MRLRSFAFLG FMLLVAMAPS MASAQPQPLD RIVAVVNKDA IMQSRLEDRV TQVRRQMASR
NVPAPNEADL RRQVLDRMIL EQIQLQMAER ANLSIDDTQL NATVRGIAED NGMSMDEFAD
ALEEDGMSLA SMREQVRREM LLRQVQQSQV ASRVNVTDRE VERYLDQQGE TADTAYHLAH
ILVSVPESPT PEQVEQAQAK VRDLYRQLQN GANFAQLATA ESDGQQALSG GDLGWRRGDQ
LPSLFADVVP TLSNGEVSEP IRSPSGFHLV KLIDTRGQQG EQKRVVTENR VRHILIGTNP
NRNDQQAEAL ARDIRQRIAN GESFAALAQE YSDDDGSALD GGELGWTRPG QMVPAFEDAV
KALDVGELSQ PVRSRFGYHV IELEDRRRQD VTRDAQREQI RQTLFQRKVS DEMEAWTQEI
RSGAYIDNRL EDGRQ
|
|---|
| |