Gene Csal_0855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0855 
SymbolaceE 
ID4027819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp955255 
End bp957945 
Gene Length2691 bp 
Protein Length896 aa 
Translation table11 
GC content62% 
IMG OID637966024 
Productpyruvate dehydrogenase subunit E1 
Protein accessionYP_572911 
Protein GI92112983 
COG category[C] Energy production and conversion 
COG ID[COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component 
TIGRFAM ID[TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTGG AGGCAAGAGA AGATCTCGAT CCGATCGAAA CCACGGAATG GCTGGATTCC 
TTGGCCTCGG TCATCGAGCA TGAGGGCGAA GAACGTGCTC GGTATATCAT GAGTCGCCTG
GCGGACCGCC TGCGTCGCGA TGGCTCTTCA CCGCCGTTTT CCGGGACCAC GCCGCATCGC
AATACCATCC CGATGCATCG TGAAGCCAAG ATGCCCGGCG ACATGTTCAT CGAGCGCAAG
ATTCGCTCGG CCATTCGCTG GAACGCGATG GTGCAGGTGC TGCGCGCCAA CAAGAAGCAC
AAGGGCCTGG GCGGTCACAT TGCCAGCTAC CAGTCCAGTG CGACCTTGTA CGAAGTGGGC
TTCAACCACT TCTTCCGCGC GGACAATGGC GATCACAAGG GCGACCTGCT GTACATCCAG
GGGCACGTGA CGCCGGGCAT CTATGCGCGT TCCTTCCTCG AAGGCCGCCT GACCGAAGAG
CAGATGGACA ACTTCCGTCA GGAAGTCGAC GGCGACGCGC TGCCGTCTTA CCCCCACCCG
TACCTGATGC CGGATTACTG GCAGTTCCCC ACGGTCTCCA TGGGACTGGG GCCGATCCAG
GCGATCTATC AGGCTCACGT GATGAAGTAC CTGCATTCGC GTGAACTCGA GGACATGAAG
GACCGCAAGG TCTGGGCATT CCTGGGGGAC GGCGAGTGCG ACGAGCCCGA AACCCTCGGC
GCGCTGCATC TGGCCAGCCG TGAAAAGCTC GACAACCTGA TCTTCGTCAT CAACTGCAAC
CTGCAGCGTC TCGATGGCCC GGTGCGTGGC AACTCGCGCA TCATCGACGA GCTGGAAGGC
GTCTTCCGCG GTGCCGGCTG GAACGTGATC AAGGTCGTGT GGGGCGGTCA GTGGGACCCG
CTGTTCGAGC AGGACGCCAA CGGCATGCTG CAAAAGCGCA TGGACGAGGC GGTCGACGGC
GAGTACCAGA ACTACAAGGC TCAGGGCGGT GCCTACACCC GCGAGCATTT CTTCGGCAAG
TACGAAGAAA CCGCGGCGAT GGTCAAGGAC TACACCGACG AGCAGATCTT CCGTCTCAAC
CGGGGCGGCC ACGACCCGCA GAAGGTCTAT GCGGCCTACC ATGAAGCGGT CAACAACGCG
GGCAACCGTC CCACCGTGAT CCTGGCGCAC ACCGTCAAGG GTTACGGCAT GGGCGGCGGC
AGCGGCGAAG CCGACATGGA AGCCCACCAG ATCAAGTCGA TGGATACCGA CGCCCTCAAG
GCGTTCCGCG ACCGGTTCGG CATCCCGATC TCCGACAAGC AGATCGAAAG CGGCGATATT
CCGTACTACA AGCCCGACGA CGACAGCCCG GAGATGAAGT ACCTGCATCT CCAGCGCGAG
AAGCTCGGCG GCTTCTTGCC GGCACGCAAG AACGACTTCG AGGCGCTCGA GATCCCCGGG
CTCGACGACA AGATGTTCGC GTCCCAGCTC AAGGGCTCCG GCGACCGTGA AGTGTCCAGC
ACGATGTCCT TCGTGCGCGT GCTCAACGGC TTGGTCAAGA ACAAGCAGCT CGGCTCGCGG
GTGGTGCCGA TCATTCCCGA CGAGGCGCGT ACCTTCGGGA TGGAGGGCAT GTTCCGTCAG
CTTGGCATCT ACGCCGCCGA AGGCCAGAAG TACGAGCCGA TGGATGCCGG TCAGATCATG
TACTACCGCG AGGATCAGAA AGGCCAGATT CTCGAGGAAG GCATCACCGA AGCCGGCTCC
ATGTCCGCGT GGATCGCGGC GGCGACGGCG TACGCCAACC ACCACCTGCC GCTGATTCCG
TTCTACGTCT ACTACTCGAT GTTCGGCTAT CAGCGTGTCG GCGACCTGGT CTGGGCCGCC
GGTGACCTGC AGGCGCGTGG CTTCATGATC GGCGGTACCG CCGGGCGTAC CACCATCAAC
GGCGAAGGCC TGCAGCACCA GGACGGCCAC AGCCATATCC TGATGTCGAC CGTGCCGACC
TGCCGTGCCT ACGACCCGTG CTATGGCCAC GAGGTGGCGG TCATCCTGCA GGACGGGCTG
AAGCGGATGT TCCAGGACAA GGAAAACTGC TTCTACTACC TGACCGTGAT GAACGAGAAC
TACCCGCACC CGGAAATGCC GGAGGGCAGC GAGGAAGGCA TCGTTCGCGG CATGTATCGT
CTCTCGGAAG GCAAGAAGGA CGGCCGCAAG AAACAGCCGC GCGTGCAGCT GTTGGGCAGC
GGCACGATCC TGCGCGAAGT CGAGGCCGCC GCCGAGATGC TGGCGGAAGA GCATGGCGTG
GTCGCCGACG TGTGGAGCGT GACCAGCTTC AACGAGCTGC GTCGCGAAGC GCTCGAATAC
GACCGCCTGC AGTTCCTCGA CTACGATGAG AAGCGTGAGA AGCCGTGGGT GGTGCAGCAG
CTGGATAGCG CCGAAGGGCC GGTCGTCGCC TCGACCGACT ACATGAAGCT CTACGCCGAC
CAGATCCGCG CCTGGGTACC GAGCGACTTC CACGTGCTGG GGACCGATGG TTTCGGACGT
TCCGACACGC GTGAAGCGCT GCGTCGTTTC TTCGAAGTCG ACCGCTACTA CGTCACCATT
CAAGCGCTGC GCGCGCTGGC CAATCGCGGT GAGATCGACG TCAAGGTCGT CAACGATGCC
ATGAAGAAAT ACGGCATCGA CCCCGCCAAG CCCAGCCCGC TGGTGTCTTG A
 
Protein sequence
MSLEAREDLD PIETTEWLDS LASVIEHEGE ERARYIMSRL ADRLRRDGSS PPFSGTTPHR 
NTIPMHREAK MPGDMFIERK IRSAIRWNAM VQVLRANKKH KGLGGHIASY QSSATLYEVG
FNHFFRADNG DHKGDLLYIQ GHVTPGIYAR SFLEGRLTEE QMDNFRQEVD GDALPSYPHP
YLMPDYWQFP TVSMGLGPIQ AIYQAHVMKY LHSRELEDMK DRKVWAFLGD GECDEPETLG
ALHLASREKL DNLIFVINCN LQRLDGPVRG NSRIIDELEG VFRGAGWNVI KVVWGGQWDP
LFEQDANGML QKRMDEAVDG EYQNYKAQGG AYTREHFFGK YEETAAMVKD YTDEQIFRLN
RGGHDPQKVY AAYHEAVNNA GNRPTVILAH TVKGYGMGGG SGEADMEAHQ IKSMDTDALK
AFRDRFGIPI SDKQIESGDI PYYKPDDDSP EMKYLHLQRE KLGGFLPARK NDFEALEIPG
LDDKMFASQL KGSGDREVSS TMSFVRVLNG LVKNKQLGSR VVPIIPDEAR TFGMEGMFRQ
LGIYAAEGQK YEPMDAGQIM YYREDQKGQI LEEGITEAGS MSAWIAAATA YANHHLPLIP
FYVYYSMFGY QRVGDLVWAA GDLQARGFMI GGTAGRTTIN GEGLQHQDGH SHILMSTVPT
CRAYDPCYGH EVAVILQDGL KRMFQDKENC FYYLTVMNEN YPHPEMPEGS EEGIVRGMYR
LSEGKKDGRK KQPRVQLLGS GTILREVEAA AEMLAEEHGV VADVWSVTSF NELRREALEY
DRLQFLDYDE KREKPWVVQQ LDSAEGPVVA STDYMKLYAD QIRAWVPSDF HVLGTDGFGR
SDTREALRRF FEVDRYYVTI QALRALANRG EIDVKVVNDA MKKYGIDPAK PSPLVS