| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0840 |
|---|
| Symbol | |
|---|
| ID | 4027403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 937470 |
|---|
| End bp | 938924 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637966006 |
|---|
| Product | lytic transglycosylase |
|---|
| Protein accession | YP_572896 |
|---|
| Protein GI | 92112968 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.602235 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATG CTCTGCTTCG TTACATGCGC CCCGTGGCGA CGGCATTCGT TGCCCTGCTG
GCGCTGCTGA TCCCCGACAA CCGTACCTCC CACGAACCGG ATGCGGCCTT GTCGGCGATT
CTGTCGCGCG ACTTCATCCA GGTGTTCACG CGCAACACCC CGACCACGTA TTACGAAGGC
CGTCACGGCC CGACAGGGTT CGAGTACGAC CTGGTGCGGC GTTTCGCGGA ATCGCTGGAT
GTCAGCCTCT CCCTGAACAG CGTCGGCAAT ATCGGCGACG TTCTCAGCGC CGTGCGCGAC
GGACGCGCCG ACCTGGGCGC CGCCACCCTC TCGCTCGACC CGGCCGAACC CGGCATTCTC
TACAGTCGCC CCATCATGTC GATGCAGCCC ATGGTCATCT ACCACCGCGG CATTCCGGCC
CCGACGACGC CGGAGGATCT GCTCGGGCTC GATATCGCCG CACTGCGCGG CTCGGGCACC
GGTCGCGCCC TGCGCGACCT GCAAAAGTCG CTGCCCGAAC TGACCTGGCA GGAAACCGAC
GAGCTGGAAG TCACCGATCT CATCGAGATG GTCGAGAAAG GCGAATTCGA TGCCGCCGTC
GTCTATGCAC ACCAGTTCAA GCTCAACCGG CTCTTTTTCC CCGACGTCGA AAACGGATTC
ATGCTGGGGG CGCCGCAAAG CCTGGTCTGG GCGTTTCCCA AGGACAGCGG CGTGGCGCTG
CTGCAAGCCG CCAACCGGCT CATCGACCGT CTGCACGCCA GCGGCCAGCT CGATGAGCTG
ATCGCACGCT ACTTCGGTCA CGACGATTAT CTCGAATACG TGGGGGCGCG CCTGTTCATT
CGCCACGCCC AGGCACGCCT GCCCCGCTAC GAGGCTGCGT TCAAGGAAGC GGCCCGCGAC
ACCGGTTTCG ACTGGAAGCT GCTCGCCGCG CTGGGCTATC AGGAATCGCA CTGGAAGCCG
CGCGCCACGT CACCGACCGG CGTGCGTGGC CTGATGATGC TGACCAACGA CACGGCCGCC
GAAGTCGGCG TGACCAATCG CCTGGATCCC GAGCAAAGCA TCGAAGGCGG CGCGACGTAC
CTGCTTCACG TGAAGGGACG CCTGCAGGAG GAAATCACCG AGCCGGATCG CACCTGGATG
GCGCTGGCCG CCTACAACGT GGGCCTGGGG CATCTCTACG ATGCCCAGAA GATCACCGAG
ATGCAGGGCG GCGATCCCTA TAAATGGGCG GACGTGCGCA AGGCCCTGCC ACTGCTTCAA
AAGCGCAAGT GGTACAGCCA GGTGCGCCAT GGCTACGCAC GCGGCGGCGA GCCGGTGATC
TACGTGCGCA ACATTCGCCG TTACTACGAG ATCCTCAATT ACGTGGACCG CAGCCGCCGT
CAGTTCCACC ATCTCGGCGA GCGCGACGAC ACCTTCCCCC AGACACCCTT CAATACCGTT
CCGCCGGTGC TTTAG
|
|---|
| Protein sequence | MFDALLRYMR PVATAFVALL ALLIPDNRTS HEPDAALSAI LSRDFIQVFT RNTPTTYYEG
RHGPTGFEYD LVRRFAESLD VSLSLNSVGN IGDVLSAVRD GRADLGAATL SLDPAEPGIL
YSRPIMSMQP MVIYHRGIPA PTTPEDLLGL DIAALRGSGT GRALRDLQKS LPELTWQETD
ELEVTDLIEM VEKGEFDAAV VYAHQFKLNR LFFPDVENGF MLGAPQSLVW AFPKDSGVAL
LQAANRLIDR LHASGQLDEL IARYFGHDDY LEYVGARLFI RHAQARLPRY EAAFKEAARD
TGFDWKLLAA LGYQESHWKP RATSPTGVRG LMMLTNDTAA EVGVTNRLDP EQSIEGGATY
LLHVKGRLQE EITEPDRTWM ALAAYNVGLG HLYDAQKITE MQGGDPYKWA DVRKALPLLQ
KRKWYSQVRH GYARGGEPVI YVRNIRRYYE ILNYVDRSRR QFHHLGERDD TFPQTPFNTV
PPVL
|
|---|
| |