| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0678 |
|---|
| Symbol | |
|---|
| ID | 4026706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 761062 |
|---|
| End bp | 762114 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637965848 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_572738 |
|---|
| Protein GI | 92112810 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.10494 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAA GACGCAAATT TCTGATCAAT GCCGCAGCCG GTGCAGCCAT CATGCCGCTG
GCCTCGAGGG TCATGGCCCA GTCATCCTCC GAGCCGACCA TCAAGTGGCG CATGCAAACC
TATGCCGGTG CCGCCCTGGC CGAGCATGTG GCCAAGCCTG CCATCGACCT GTTCAACCGG
ATCGCCGGGG ATCGCATGCA GATCGAGCTG TACAGTGCCG ATCAACTGGT GCCGACCGGA
GAGCTGTTCC GGGCGATGCA GCGCGGCACC ATCGATGCCG TGCAGTCGGA TGACGATTCG
ATGGCATCTC CCACCGAGGT CACCGTCTTC GGAGGGTACT TCCCCTTCGG TTGCCGTTAT
AGCCTCGATG TGCCGGTACT GTTCAATCAG TACGGGCTCA AGGAAATCTG GGAAGAGGAG
TACGCCAAGG TCGGCGTCAA GCATGTGAGC GCCGGCGCCT GGGATCCGTG CCATTTCGCC
ACCAAGGAGC CGATTCGCAG CCTCAAGGAC CTGGAGGGCA AGCGTGTCTT TACCTTCCCC
ACCGCCGGAC GTTTTCTGTC CCGGTTCGGT GTCGTGCCGG TCACGTTGCC CTGGGAAGAC
ATCGAGGTGG CCTTGCAGAC CGGCGAGCTG GACGGGATCG CCTGGTCCGG CATCACCGAG
GACTACACGG TCGGTTGGGC CAACGTGACC AACTACTTCC TGACCAACAA CATCTCGGGT
GCCTGGATCG GCCATTTCTT CGTCAATATG GAACGCTGGG AGGAGCTTCC GGAAGACCTC
AGACTCCTGT TCGAGGTGTG CTGTGAGCAG TCTCACTACC ATCGCCAGTA CTGGTACTGG
GGTGGCGAGG CCAGGCTGCG CGTCCACGGT GACAAGCTGG AGCTGACTTC CATTCCCGAC
GCCGAGTGGG ATCAGGTAGA AACGGCGGCC CAGGAGTTCT GGGATGAAAT CGCGGCGCAA
TCCGAGACCA AGGCCAAGGT GGTCGAAATC TTCAAGCAGT ACAACGCCGA TATGCGCAAG
GCCGGCAGGC CCTATCGTTA CGTCGATGCA TGA
|
|---|
| Protein sequence | MTTRRKFLIN AAAGAAIMPL ASRVMAQSSS EPTIKWRMQT YAGAALAEHV AKPAIDLFNR
IAGDRMQIEL YSADQLVPTG ELFRAMQRGT IDAVQSDDDS MASPTEVTVF GGYFPFGCRY
SLDVPVLFNQ YGLKEIWEEE YAKVGVKHVS AGAWDPCHFA TKEPIRSLKD LEGKRVFTFP
TAGRFLSRFG VVPVTLPWED IEVALQTGEL DGIAWSGITE DYTVGWANVT NYFLTNNISG
AWIGHFFVNM ERWEELPEDL RLLFEVCCEQ SHYHRQYWYW GGEARLRVHG DKLELTSIPD
AEWDQVETAA QEFWDEIAAQ SETKAKVVEI FKQYNADMRK AGRPYRYVDA
|
|---|
| |