Gene Csal_0672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0672 
Symbol 
ID4026700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp753996 
End bp756281 
Gene Length2286 bp 
Protein Length761 aa 
Translation table11 
GC content66% 
IMG OID637965842 
Product5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 
Protein accessionYP_572732 
Protein GI92112804 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0620] Methionine synthase II (cobalamin-independent) 
TIGRFAM ID[TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTGG CACACATTCT TGGCTATCCG CGCATTGGCG CGAATCGCGA ACTCAAAAAG 
GCCGTCGAGG CTTACTGGAA GGGAGATATC GACCAGGCCG AGCTGGAACG TCGTGGCCAG
GCGTTGCGGG CCGAGCACTG GCAGGCCAGC CGCGATGCGG GACTCGATTT CGTGACCGTC
GGCGATTTCG CCTTCTACGA CCAGGTGCTG AACGTCAGCG CGATGCTCGG CGCGGTGCCG
CCGCGCTTCG GCGCCATCGA CGGCGATGTC GACCTGGATA CGACATTTCG CATGGCGCGT
GGCCGCGCGC CGAGCGGCAC CCCCGCCGCC GCCTGCGAAA TGACCAAGTA CTTCGATACC
AATTATCACT ACCTGGTGCC CGAGCTGCAT GCCGGCCAGC GCTTCCGGGT GGCGTCCACG
CGCTTGTTCG ACGAGGTCGC CGAGGCCCAG GCCGCGGGGC ATCCGGTCAA GGTGGCCCTG
CTGGGGCCGG TGAGCTGGTT GTGGCTGGGC AAGGAAAAGA GTGCCGGGCT CGACCGCCTG
ACGCTGCTCG ACGACGTGTT GTCGGTCTAT GGGGAAATCC TCGAGCGTCT CGCCGCGCAA
GGTGTCGAAT GGGTGCAGCT CGACGAGCCG GCGCTGGTGC AGGATCTGCC CCGCGATTGG
CGCCAGGCGT TCGAGTCCGC CTACAACAAG CTGCAATCCG CGCCGGTCAA GCTGTTGCTG
GCGACCTACT TCGGGGCGCT GGGCGACAAC CTGGGCCTTG CCGCAGGGCT GCCGGTAGCC
GGCCTGCATA TCGACACGGT GCGGGCGCCC GAGCAACTCG ACGCCGTGCT CGATCGCCTG
CCCACCTACA AGGTGCTGTC CCTTGGCGCC ATCGACGGGC GCAACATCTG GCGCGCCGAT
CTGGCAGCGC TGCGTGAGCG TCTGCAGGTA GCCCGGGCGC GTCTCGGCGA GCGCCTGTGG
ATCTCCGCCT CCTGCTCGTT GCTGCATGTG CCGGTGGACC TCGACGCGGA AACCGACCTC
GATGCCGAGC TCAAGAGCTG GCTGGCCTTC GCGCGGCAAA AGCTCGACGA GATCGTCACG
CTGGCGCATC TGCTCGACGG TCGCGCCACG CCGGAAGACA CCGCGCGACT GGAAGCTGCG
ACGTCGGCGC TGGACGCACG CCGTCAATCG CCGCGCATCC ACAAGCCGGC CGTGGGCGAG
CGTCTGGCGG CGGTGTCCGC CGACGATGCC GAGCGTGCAA GCCCCTACGC GACGCGTGCC
AAGGCGCAGC ATCGCCACCT GGACCTGCCA CTGTTTCCGA CCACCACGAT CGGCTCCTTT
CCGCAGACCC AGGACATCCG GGCCGCACGA CGCGCCTTCA AGAGCGGCGA GCTGAGCCGC
GATGACTACG AGGCCCGCAT GCGCGACGAA ATCGCCCATG CCGTCGAACG CCAGGAAGCG
CTGGCCATCG ACGTGCCCGT GCACGGCGAG CCGGAACGTA ACGATATGGT CGAGTACTTC
GGCGAGCTGC TGGACGGCTT TGCCTTCACG CGTTTCGGCT GGGTGCAGAG TTACGGCTCG
CGCTGCGTGA AGCCGCCGGT GATCTTCGGC GATGTGAGCC GTCCCGGGCC GATGACGGTG
CGCTGGAGCG AATACGCGCA ATCGCTGACC GACAAGCCGA TGAAGGGCAT GCTCACCGGC
CCGGTGACCA TCCTGCAGTG GTCCTTCGTC CGCGATGACC AGCCGCGCGA TGCCACCTGT
CGGCAGATTG CCCTGTCCCT CCGGGACGAG GTCGCCGATC TCGAGGCGGC AGGCATCAAG
ATCATCCAGA TCGACGAGCC GGCACTGCGT GAAGGCCTGC CGCTGCGGCA GGGTGAGTGG
CAGGAGTATC TCGACTGGGC AGTGAAAAGC TTCAAGCTGA GCGCGGCGGT GGCCCGTGAC
GAGACGCAGA TCCACACGCA CATGTGCTAC TCGGAATTCA ACGACATCAT CGCGGCGATC
GCGGCCCTGG ATGCCGACGT CATCACCATC GAGACGTCGC GTTCCGACAT GGAACTGCTC
GATGCCTTTC AGGATTTCGC GTATCCCAAC GAGATCGGCC CGGGGGTGTA TGACATCCAT
TCGCCGAACA TTCCCGAGGT GGAATGGATG GTGAGCCTGA TGGAAAAGGC CGCCGAGAAA
ATCCCGGCCG AGCGGCTTTG GGTGAACCCG GACTGTGGCC TGAAAACACG CGGGTGGGCC
GAAGTCGAGC CGGCGCTGGC CAACATGGTG GAGGCCGCAC GGGAGTTGCG TCGCCGTTAC
GGCTGA
 
Protein sequence
MALAHILGYP RIGANRELKK AVEAYWKGDI DQAELERRGQ ALRAEHWQAS RDAGLDFVTV 
GDFAFYDQVL NVSAMLGAVP PRFGAIDGDV DLDTTFRMAR GRAPSGTPAA ACEMTKYFDT
NYHYLVPELH AGQRFRVAST RLFDEVAEAQ AAGHPVKVAL LGPVSWLWLG KEKSAGLDRL
TLLDDVLSVY GEILERLAAQ GVEWVQLDEP ALVQDLPRDW RQAFESAYNK LQSAPVKLLL
ATYFGALGDN LGLAAGLPVA GLHIDTVRAP EQLDAVLDRL PTYKVLSLGA IDGRNIWRAD
LAALRERLQV ARARLGERLW ISASCSLLHV PVDLDAETDL DAELKSWLAF ARQKLDEIVT
LAHLLDGRAT PEDTARLEAA TSALDARRQS PRIHKPAVGE RLAAVSADDA ERASPYATRA
KAQHRHLDLP LFPTTTIGSF PQTQDIRAAR RAFKSGELSR DDYEARMRDE IAHAVERQEA
LAIDVPVHGE PERNDMVEYF GELLDGFAFT RFGWVQSYGS RCVKPPVIFG DVSRPGPMTV
RWSEYAQSLT DKPMKGMLTG PVTILQWSFV RDDQPRDATC RQIALSLRDE VADLEAAGIK
IIQIDEPALR EGLPLRQGEW QEYLDWAVKS FKLSAAVARD ETQIHTHMCY SEFNDIIAAI
AALDADVITI ETSRSDMELL DAFQDFAYPN EIGPGVYDIH SPNIPEVEWM VSLMEKAAEK
IPAERLWVNP DCGLKTRGWA EVEPALANMV EAARELRRRY G