Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0660 |
Symbol | |
ID | 4026688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 738316 |
End bp | 739353 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637965830 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_572720 |
Protein GI | 92112792 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.255393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATCC TCACCCCGCG CAACGTCCTG CTGGCCGCCG TCACGACCGG CATGATGGCC ACCGTGAGCC TGGCCAATGC GGCGACCACC CTCAATCTGA GCTACAACGG CCCCCCCGAT ACCGACAAGA ATGCCGTGCA CCTCTTTGCC AGCAACCTCA AGCGACTGGT AGAGGAGAAG ACCGATGGCG ACATTCAGCT CAAGCTTTAC CCCAACTCCA TGCTCGGCGA AGAGCAGGAA CGCATGGAGC AGGTCATCAA TACCCCGAGC TTGAACATTG CATCGTTCGC CGGCCTGTCG CCGATCGTGC CGGAGATTTA TGTCAGCGCG ATTCCCTTCT TGTTCGAGGA CTATGAAGCC GCCCACCAGT TCTTCGACGA GGGCGATTAC TGGAACAAGG TCGAGGATAC TCTCGAGGAG CGTACCGGCG CCGAGCTGCT CGGTGTCATC GAGGAGGGCG GCTTCCTCGA CTTCACCAAC TCGAAGCGTC CCATCAGCAG TCCGGAGGAT TTCGAGGGCC TGCGCTTTCG TGCCATGGAC CCCAGCCAGG TAGCGCTTTA CGAGGCCTTT GGTGCCTCCG GCACGCCGAT CCCCTGGACC GATACCTACA TGGCGCTCAA GACCAACGTC GCCGATGGCC AGATGAACCC GCCGATGTAC ATCATCATGG GCAGCCTCTA CGAGGTGCAG AAGTATCTGA CACTGGCCAA TGTGCAGTAT TCGGACCAGT TCTTGATTGC CAACGGCGAA TGGTACGACG ACCTTTCCGA AGAAAACCGC CAAGCGATCG AGGCGGCTGT CCAGGAAGCC AGCGAGCTCA ACCGGGAAGA TGTCGAGAAG CGGGTCGACG AGCGCATCCA GTTCCTGGCC GACCAGGGCA TGGAAGTCAT CGAGCCCACC GAGGATGAGC TTGCTGCCTT CCGCGAGAAG GGGCAGCCGG CCTATATCGA GTGGCTGACG GACGAGCAGG GCATTGACCG GGCATGGATC GAAATGGCCC TCGAAGATGC TGGGCAGAGT GACCTGCTCG CCAACTGA
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Protein sequence | MRILTPRNVL LAAVTTGMMA TVSLANAATT LNLSYNGPPD TDKNAVHLFA SNLKRLVEEK TDGDIQLKLY PNSMLGEEQE RMEQVINTPS LNIASFAGLS PIVPEIYVSA IPFLFEDYEA AHQFFDEGDY WNKVEDTLEE RTGAELLGVI EEGGFLDFTN SKRPISSPED FEGLRFRAMD PSQVALYEAF GASGTPIPWT DTYMALKTNV ADGQMNPPMY IIMGSLYEVQ KYLTLANVQY SDQFLIANGE WYDDLSEENR QAIEAAVQEA SELNREDVEK RVDERIQFLA DQGMEVIEPT EDELAAFREK GQPAYIEWLT DEQGIDRAWI EMALEDAGQS DLLAN
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