| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0632 |
|---|
| Symbol | |
|---|
| ID | 4025979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 709532 |
|---|
| End bp | 710488 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637965803 |
|---|
| Product | DeoR family transcriptional regulator |
|---|
| Protein accession | YP_572693 |
|---|
| Protein GI | 92112765 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.289497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAT ACGAACTCAA GCGCGAGCAG GCGGCGCGCG CGGCCTGGCT CTCCTACGTC
GGTGGGCGCA CGCAGGACGA TATCGCCCGC CTGCTGGGCG TCTCGCGACC CGGGGTCCAG
CGCTTGCTGG CCCTGGCGCG TCAGGAAGGG CTGGTCAAGG TACATGTCGA TCATCCCATC
TCCCAGTGCA TGGCCATGGG CGAGGCGATT CTCACGCACT TCGGATTGGA TTTCTGCGAT
GTGGTGCCCA GCGACCCCGA GCTGCCGGAA AGCAGTCCTC GCTTTCTCGC CCAGGCCGGC
GCCGAACGGC TGGCGAGCCT TCTCGATCGT CAAGCGCCCC TGACGCTGTC GCTGGGTACC
GGGCGTTCGG TGCGTGCCAC CGTGGAAGCC CTGAGTCGCC TGGATCGCTC GCAGCATCGT
ATCGTCTCGC TGGTGGGCAA TGTCGCCCGC GACGGTTCCG CCAACCGCTA TGACGGGGTG
ATGGTCCTGG CCGACAAGAC CGGGGCGGAG CGCTTCCTGC TGCCCGCGCC GGTAGTGGCC
GCCTCGGTGG AAGAGAAGGA AGCGTTGCTT GCCCAGCAGC TGGTGCAGGC GGTGTTTCAT
ATCGCCCGCG AGGCCGAAAC CGGGGTCATC GGCATTGGCC GCATCGATCC GCGCGCGACC
CTGTTCCAGG ATCATTTCAT CAGCGAGGCC GAACTCAACG AGCTGCTCGA GGCCGGTGCG
GTAGGAGAAC TGCTCGGCTG GCCGCTGGAT ATCCAGGGAC GGCTCATCGA CTGTCCGATC
ACGCGTCGCA TCACCAGCCT GCCGCTCTCG GCACTGGGCG GGCAGCCGCT GATGGGCCTG
GCGGGCGGGC ACGACAAGGG GCCGGCCATC CTGAGCGCCC TGCGAGGCGG CTGGCTCAAG
GGACTGGTGA CGGACGAAGC GGCGGCTCGC TATATCGTGT CCGCATTGGG GGCTTAG
|
|---|
| Protein sequence | MDKYELKREQ AARAAWLSYV GGRTQDDIAR LLGVSRPGVQ RLLALARQEG LVKVHVDHPI
SQCMAMGEAI LTHFGLDFCD VVPSDPELPE SSPRFLAQAG AERLASLLDR QAPLTLSLGT
GRSVRATVEA LSRLDRSQHR IVSLVGNVAR DGSANRYDGV MVLADKTGAE RFLLPAPVVA
ASVEEKEALL AQQLVQAVFH IAREAETGVI GIGRIDPRAT LFQDHFISEA ELNELLEAGA
VGELLGWPLD IQGRLIDCPI TRRITSLPLS ALGGQPLMGL AGGHDKGPAI LSALRGGWLK
GLVTDEAAAR YIVSALGA
|
|---|
| |