Gene Csal_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0627 
Symbol 
ID4025971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp705009 
End bp705206 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content56% 
IMG OID637965795 
Productcarbon storage regulator, CsrA / carbon storage regulator, CsrA 
Protein accessionYP_572688 
Protein GI92112760 
COG category[T] Signal transduction mechanisms 
COG ID[COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) 
TIGRFAM ID[TIGR00202] carbon storage regulator (csrA) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000917661 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATCC TGACCCGTCG CGTCGGTGAA ACACTGATGA TTGGCGACGA TATCACCGTC 
ACTGTACTTG GCGTGAAAGG CAACCAAGTG CGCATTGGCG TCAATGCGCC GAAAGACGTG
GCCGTCCATC GCGAGGAAAT CTATCAGCGC ATTCAGCGCG AGAAGACCGA TAGCGAGGAT
GACGGTTCAA GCGTCTGA
 
Protein sequence
MLILTRRVGE TLMIGDDITV TVLGVKGNQV RIGVNAPKDV AVHREEIYQR IQREKTDSED 
DGSSV