Gene Csal_0611 details

Gene Information

• Locus tag: Csal_0611
• ID: 4029080
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 679872
• End bp: 680432
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637965779
• Product: pilus assembly protein, PilQ
• Protein accession: YP_572672
• Protein GI: 92112744
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3168] Tfp pilus assembly protein PilP

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0576908
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGATC AGGCGAAGCC GTGGCTGCGA GGGATGGCCC TGGTGGCGGG CCTGGCCGGG 
GTCGTCGCGA TCGGCGGCTG TCGCGATGCC GACCTGGCCT CTCTGGAGGC GCATCTCGAT 
GCCTTGCGGG AACGCCCCGA GGGCAATATC GATGCGCTGC CGCCCGCGCC GGTCTACCGT 
ACGGCGCATT ACACCCAGGC CGGTCAGCGC AGTCCGTTCC GCGCCACGCG CGAGTCGTCG 
GGGACCGAGT CGGCGACGGG GCAGGCCGGG CGTCCCGATC GCGAGCGTCC GCGCGAGCCG 
CTGGAGCAGT TTGCACTGGA GCGGCTCGAG CTGGTGGGCA CCCTGACGGT GGCCGGCCGG 
CCCTCTGCGC TGATCCGGGC TCCCGACGGC CACGTCTACC GGGTGTTTCG AGGGCATTAT 
CTGGGCACCG ACTTCGGGCG CATCACGGCC ATCGGCGACA GCGGCGTCGA GCTGATCGAG 
CGGGTGCGGG ACGCTGGCGG TGGATGGCGT GAGCGGCACC GCACACTCAA TTTCAACGAT 
TCATCCCAAG CCGCCGAATA G 

 

Protein sequence

MIDQAKPWLR GMALVAGLAG VVAIGGCRDA DLASLEAHLD ALRERPEGNI DALPPAPVYR 
TAHYTQAGQR SPFRATRESS GTESATGQAG RPDRERPREP LEQFALERLE LVGTLTVAGR 
PSALIRAPDG HVYRVFRGHY LGTDFGRITA IGDSGVELIE RVRDAGGGWR ERHRTLNFND 
SSQAAE