Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0571 |
Symbol | |
ID | 4026308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 633134 |
End bp | 635506 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637965739 |
Product | surface antigen (D15) |
Protein accession | YP_572632 |
Protein GI | 92112704 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGGC GGACTCGAGA GAAGCGAATC GACTGCATGA AGATCAAGAC CATCGGATTG GCGGCGCTGC TGCTGACCGC GGCTCCCGCG GCGCTGGCGG CCCCCTTCGA GATTTCAGAC ATTCGCGTGG AAGGGCTGCA GCGCGTTTCG CCGGCATCGG TGTTCAACGC CTTTCCGGTC AGTGCCCACG AGACGGTCGA TGACCGTGAA CTGGCGGAGG CGTCGCAGCA GCTTTTCGAC ACCGGCCTGT TCGACGACAT CGAGCTGTTG CGCGACGGTG ACGTGTTGAT CGTCAATGTG GTCGAGCGCC CCACGATCGC CTCCATCGAA CTCGACGGCA ACTCCCAGGT GTCCGACGAC GATCTGCGCA AGGGCATGAC CGAGGCCGGG CTCGCCGAGG GGCAGGTGCT GCAGCGTTCG ACGCTGGACG AGGTGCAGCG TGAGCTGGAA CGGCTCTACC AATCCCAGGG ACGTTACAGC GCCAGCATCG ACACCAACGT CGAAGAACTC GACAACAATC GGGTCGAAGT CGATATCGAC ATCAACGAAG GGGCCGTCGC CAAGATCCAG AAGATCAACT TCGTCGGCAA CCAGGATTTC GACGACGAGA CCCTGCGTGA TCTGTTCGCG CTGGAAGACA AGCCCGGCTG GTTCCTGGGC TGGTTCTCCG ACGACGAATA CTCGCGCGAC AAGCTCTCCG GCGACCTCGA GACGCTGCGC TCCTTCTACC TGGACCGGGG CTACGTCAAT TTCGACATCC GCTCGTCGCA GGTGTCGATC AGTCCCGACA AGTCCAAGAT CTTCATCACC ATCAACGTCG ACGAGGGCCA GCGCTACAAG CTCGACGAGA TTCGCTTCGC CGGTGACTTG AAGATCGGCG AGGACAAGGC ACGCGAGCTG GTGACGGCCA CGCCCGGCGA ATATTATTCG CAAAGCGCCA TGACCGAATC CGCCGAGGCC CTGCGTCAGC GCCTCGGCGC CGAAGGTTTC GCCTTCGCCG AGGTCGACAG CGTGCCCGAG ACCGATGCCC AGGACGGCAC CGTGGACGTG ACCTTCCGTG TCGAGCCGGG GCGGCGCGCC TATGTGCGGC GCATCAACTT CGTCGGCAAT ACCACCACCC AGGACGAGGT GCTGCGCCGC GAGATGACCC AGATGGAAGG GGCGCCGGCG TCCACCGACC AGATCAGCCA GTCCCGCGAG CGTCTTGAGC GTCTCGGGTT CTTCCGTACG GTCGATGTGG AAACCCGGCC CGTCGCCGAT CATCCCGACC AGCTCGATGT CACCTACAAC GTCGAGGAGC AGCCCTCCGG TTCGGTGTCG GCCAGCCTGG GGTATTCGCA AAGCGCCGGT GTCATCTACG GGGCCGCCTT GTCCCAGAAC AACTTCCTGG GAACCGGCAA TCGCGTCAAC GTGAATGCCC AGAAGGGGGA TTACTTCACG AACCTCAACT TCGGGTTCAC CGATCCCTAC TGGACGCTGG ACGGCATCTC GCGGGGCTAT AACGTCTACT ACCGCGAAAC GGACTACGAG GACTTCGACG ATATCTCGAC GTACTCCTCC GACGCGCTGG GCGGCAGCAT CAACTTCGGG TATCCGATCA ACGAGCTCTC GCGCCTCAAC TTCGGCGTCG GGGTCGAGGA TCTGTCGCTC GAGACCTACC GTGATACGCC GGCCGAGATC ATCCAGTACA CGGAAGACGA GGGCGAGGAC TTCCTGAACT ACAAGCTCAC CGCCCGCTGG ACGCGCAACA ATCTCAACCG CGGCATCATG CCGACGGCGG GGAGCTATCA GCGCTTGTCG CTGGAAGCCG CCGTGCCGGG CAGTGACACG CAGTACTACA AGACTCGCTA CGAGGCACAG AAGCTGTTCG AGTTCCGTCC CGAGTGGTCG CTGAAGTTCA GTACCAACCT GGGCTATGCG GATACCGTCG GTGACGATGC CTATCCGTTT TACGAGAACT TCTACTCGGG CGGCCTGGGC TCGGTGCGCG GTTTCTCCAG CAACACGCTG GGCCCCAACA CGACACCGCG GAACGACGGC GACGACGATA CCCTGGGGGG CAACGTGCTC GTCGAGGGCT CGGCCGAGCT GATCTATCCG TTCCCGTGGG TCGAGGATCG CCGCTCGCTG CAGACCAGCG TGTTCTTCGA CGCGGGCAAC ACGTACCTGA CCGAATGCTA CGACGTGCCG GCAGGCAGCA CCTCCAACTG CAGCAGTGGT GTCGATCTTG GCGAGTTGCG TTACAGCGTG GGGCTGGGGC TGTCCTGGCT GACGCCGGTG GGGCCGTTGA CCTTCAGCGT CGCCAAGCCG ATCAGCGACG AAGACGGCGA TGACACGCAG GTCTTTCAGT TCTCGCTGGG TCAGACCTTC TAA
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Protein sequence | MSGRTREKRI DCMKIKTIGL AALLLTAAPA ALAAPFEISD IRVEGLQRVS PASVFNAFPV SAHETVDDRE LAEASQQLFD TGLFDDIELL RDGDVLIVNV VERPTIASIE LDGNSQVSDD DLRKGMTEAG LAEGQVLQRS TLDEVQRELE RLYQSQGRYS ASIDTNVEEL DNNRVEVDID INEGAVAKIQ KINFVGNQDF DDETLRDLFA LEDKPGWFLG WFSDDEYSRD KLSGDLETLR SFYLDRGYVN FDIRSSQVSI SPDKSKIFIT INVDEGQRYK LDEIRFAGDL KIGEDKAREL VTATPGEYYS QSAMTESAEA LRQRLGAEGF AFAEVDSVPE TDAQDGTVDV TFRVEPGRRA YVRRINFVGN TTTQDEVLRR EMTQMEGAPA STDQISQSRE RLERLGFFRT VDVETRPVAD HPDQLDVTYN VEEQPSGSVS ASLGYSQSAG VIYGAALSQN NFLGTGNRVN VNAQKGDYFT NLNFGFTDPY WTLDGISRGY NVYYRETDYE DFDDISTYSS DALGGSINFG YPINELSRLN FGVGVEDLSL ETYRDTPAEI IQYTEDEGED FLNYKLTARW TRNNLNRGIM PTAGSYQRLS LEAAVPGSDT QYYKTRYEAQ KLFEFRPEWS LKFSTNLGYA DTVGDDAYPF YENFYSGGLG SVRGFSSNTL GPNTTPRNDG DDDTLGGNVL VEGSAELIYP FPWVEDRRSL QTSVFFDAGN TYLTECYDVP AGSTSNCSSG VDLGELRYSV GLGLSWLTPV GPLTFSVAKP ISDEDGDDTQ VFQFSLGQTF
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