Gene Csal_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0562 
Symbol 
ID4026163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp624288 
End bp625079 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content64% 
IMG OID637965730 
Productmethionine aminopeptidase, type I 
Protein accessionYP_572623 
Protein GI92112695 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTC CCATCAAGAC CGCCGACGAA ATCGAAAAAA TGCGCGAAGC CGGTCGCCAG 
GCCGCTTCCG TGCTGGAAAT GATCGCGCCT CACGTGGCGG CCGGCGTCAC CACCGGCGAG
ATCGACCGGC TATGCCACGA GTACATCGTC AACGAGCTGG GCTCCACGCC GGCGCCGCTC
AACTACCACG GGTTTCCCAA CGCCACTTGC ACGTCGATCA ACCATGTCGT CTGCCACGGC
ATTCCGGACA TGGGCAAGAA GCTCAAGAAA GGCGACATCA TGAATCTCGA CATCACGGTC
AAGACCGCCG ACGGCTACCA TGGCGACTCC AGCGTGATGT TCGTGATCGG GGAAAGCATC
CAGGGCGGAC GCCTCTCGCG GGTCACCCAG GAGTGTCTCT ACAAGAGCAT CGCCGAGGTG
CGCCCCGGCG TTCGCCTCTC CGAACTGGCA CGCACGATCC AGCAGCACGC CGAGCGGCAC
GGTTACTCGG TGGTGCGCGA CTTCTGCGGC CACGGCATCG GCGCCGGCTT CCACGAGGAC
CCGCAGTTCC TGCATTATGA CGGCTACGCG CCGGAGGCCG ACGCGGTACT CGCCGAGGGC
ATGTGCTTCA CCATCGAGCC GATGCTCAAT GCGGGCGACT ATCGCACCAA GGTACTTCGC
GACGGCTGGA CGGCGGTCAC CAAGGACAAG AGTCTGTCCG CCCAGTGGGA ACACACCTTG
CTGGTCACCG CCAACGGCGT CGAGGTGCTC ACCGCCCGCC AGGACGAGGA TTTCAGCTTC
CTCGCGGCAT GA
 
Protein sequence
MNIPIKTADE IEKMREAGRQ AASVLEMIAP HVAAGVTTGE IDRLCHEYIV NELGSTPAPL 
NYHGFPNATC TSINHVVCHG IPDMGKKLKK GDIMNLDITV KTADGYHGDS SVMFVIGESI
QGGRLSRVTQ ECLYKSIAEV RPGVRLSELA RTIQQHAERH GYSVVRDFCG HGIGAGFHED
PQFLHYDGYA PEADAVLAEG MCFTIEPMLN AGDYRTKVLR DGWTAVTKDK SLSAQWEHTL
LVTANGVEVL TARQDEDFSF LAA