| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0560 |
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| Symbol | |
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| ID | 4026161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 620246 |
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| End bp | 621445 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637965728 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_572621 |
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| Protein GI | 92112693 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.370858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCCG ATCTCGACGC CCTCAAGCCG TATCCCTTCG AGAAGCTCGC CGCCCTCAAG
GCGGGAGTGA CGCCATCCGC GTCGTCCCCC ATCGCGCTGT CCATCGGCGA GCCGCGTCAT
GCACCGCCCG CCGCGGTACT CGACGCGATG CGCCGCTTCG AGGGCGAGGT CGCTCGCTAC
CCGGCCACCG CGGGTCTGCC CGAATTGCGC GACGCCATCG CCCGATGGGC GAGCCGACGC
TACGCCTTGC CTCCCGGCTC GCTCGACCCG GAACGCCACG TGCTGCCGGT CAACGGCACC
CGCGAAGCGA TCTTCGCCTT CGTTCAGGCC GCGCTGGACC GCACGCGTCC GGCCAAGGTG
GCCATGCCCA ACCCGTTCTA CCAGATCTAC GAGGGCGCGA CCCTGCTGGC CGGCGGCGAG
CCCGTCTACC TCGACTGCCC GCCCGCCAAC GGTTGCCTGC CCGACCTCGA CGCCGTGCCC
GCCGACACCT GGCGCGACGT GCAGCTCGTC TTTGTATGCT CGCCCGGCAA CCCCACGGGC
GCCGTCGCCC CACTGGCCGA GTATCGAAAG CTGATCGCCC TGGCCGACGA GCACGATTTC
ATCATCGCCT CGGACGAATG CTACTCGGAA CTCTACCTCG ACGAGCACCA GCCGCCTGCG
GGATTGCTCG AGGCCTGCGC GACCATGGGA CGCGACGACT ACCGCCGCTG CCTGGTCTTT
CACTCGCTGT CCAAGCGTTC CAACCTGCCG GGATTGCGTT CGGGCTTCGT GGCCGGCGAC
GCCGAGCTGA TCGCCCCGTT CAAGCGCTAC CGCACCTACC ACGGTTGCGC CATGCCGCTG
ACGACCCAGC AGGCCTCGAT CGTCGCCTGG GGCGACGAGC AGCATGTGCG CGCCAACCGC
GACGCCTATC GTGACAAGTT CGCCGCCGTC GGCGAGATTC TGGCACCGGT GATGGACTTC
CCCACGCCCC GCGCCAGTTT CTACCTGTGG CCGGCGGTTC CGGGGGGCGA CGACGAGGCC
TTCGCCCGCG ACCTGTTCGC CGAGGAACAC GTCACCGTGC TGCCCGGCCG CTACATGTCC
CGGGCCGGAG AGAACGGCGA TCCCGGGGCG GGACGCGTGC GTCTGGCGCT GGTCGCCGAG
GTCGAGGCCA CCGTCGAGGC GGCATACCGC ATCCGGCGTT TCATCGAGCG CCGCGCTTGA
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| Protein sequence | MNPDLDALKP YPFEKLAALK AGVTPSASSP IALSIGEPRH APPAAVLDAM RRFEGEVARY
PATAGLPELR DAIARWASRR YALPPGSLDP ERHVLPVNGT REAIFAFVQA ALDRTRPAKV
AMPNPFYQIY EGATLLAGGE PVYLDCPPAN GCLPDLDAVP ADTWRDVQLV FVCSPGNPTG
AVAPLAEYRK LIALADEHDF IIASDECYSE LYLDEHQPPA GLLEACATMG RDDYRRCLVF
HSLSKRSNLP GLRSGFVAGD AELIAPFKRY RTYHGCAMPL TTQQASIVAW GDEQHVRANR
DAYRDKFAAV GEILAPVMDF PTPRASFYLW PAVPGGDDEA FARDLFAEEH VTVLPGRYMS
RAGENGDPGA GRVRLALVAE VEATVEAAYR IRRFIERRA
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