| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0538 |
|---|
| Symbol | |
|---|
| ID | 4027677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 596231 |
|---|
| End bp | 597823 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637965706 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_572599 |
|---|
| Protein GI | 92112671 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGT GCGCCCATCG CCTTCTTGAG CTGCTCGTCG CTCACGGCAT CGAGACCGTC
TTCGGCATTC CCGGCGTGCA TACCGTCGAG CTGTATCGCG GTCTGCCCGA CAGCGGTCTG
CGCCACGTGA CCCCGCGCCA CGAGCAAGGG GCCGGCTTCA TGGCCGACGG TTACGCCCGC
GCGACCGGCA AGCCGGCCGC CTGCTTCATC ATCAGCGGTC CGGGCATGAC CAACATCGCC
ACCGCCATGG GCCAGGCACT CGCCGACTCG GTGCCCATGC TGGTGATTTC CAGCGTCAAT
CGGCGCGACA CCCTGGGTCG TGGCCAGGGC CGCCTGCACG AACTGCCCGA TCAGCAACAC
ACCCTGTCCG GGGTCAGCGT GTTCAGCCAT ACCCTGCAGA CGCCCGAGGC CCTGCCCGAG
GTGCTGGGAC GCGCCTTTGC CGTCTTCAAG AGCGCCCGCC CCGGCCCCGT GCACATCGAA
ATCCCGCTCG ACGTGATGGC CTTGCCCGCG CCCGAGACCC GGCCGCGCAT CGCCGAGGTC
TTTCCGCCGA CGGCTCCCGA TGCCGCACTG GCCTGGGCCG CCGACTGGCT CGCCGACGCC
GAACGTCCGC TGGTGCTGCT GGGGGGCGGC TGCGTCGCTG CCGGCGACGC GGTACGCACC
CTGGTCGAAC GCCTCGACGC TCCCGCCATG ACCACCATCA ACGCCAAGGG CGTGCTGGGA
TGCGATCACC CGCTCGACCT CGGCGCCTGC GCGAGCCTGC CCGCCGGCCG TGAACTCGCC
CGCCACGCCG ATGTGGTGCT GGCGCTGGGC ACCGAACTCG GTGAGACTGA CTACGACCTG
ACCTTCGATG GCGGCTTCCG GCTCGATGGC CGGCTGATCC GCGTGGACAT CGATGCCCAG
CAGCTGGCGC GCAATCACGC CACCGACCTC GCCCTGCTGG CCGACGTCGG CGAAGTGGCC
CTGGGATTGC TCGAACGCCT GCCCCATCAG GCCTCGCGCG AGGGCGCCGC CCGCGTCGCC
GACACCCGGG CGGCGCTGGC ACTGCGCGAC GCCGACGATG TCGCCCCCTA TGCCGACTTC
CTCGACACCC TGCGCGAGGC ATTGCCCGAC GCCACCATCG TCGGCGACTC CACCGGACCG
GTATATGCCG GCAACTTCAT CGCCGAGATG CCCGCGCCAC GCCGCTGGTT CAACGCCGCC
ACCGGCTACG GCACGCTCGG CTACGGGCTG CCCGCCGCCC TGGGTGCGGC CCTGGGCGTG
CCCGAGCGGC CGGTGATCGC ACTGGTCGGA GACGGCGGGC TCATGTTCAC CCTCGCTGAA
ATCGCCACCG CGCGCGAGGC CGGCGTGCCC CTGGCGATCG TGATCTGGAA CAACGCGGGG
TATGGCGAGA TCCGCCGCTA CATGGATGCC CAGGATGTGC CGCGTCTCGG CGTCGATCTT
GCCGCGCCGG ATTTCGTGAC ACTGGCCCGG TCGATGGACT GCCACGGCGT GCGCGTCTCG
ACGCGTACCG CGCTGCACCA GGCACTTCAG GCGTCGCGCC AGGCGCCGGG GCCGACCCTG
ATCGACGTCG AGGCCGACAG ATGGTCCGCT TGA
|
|---|
| Protein sequence | MTQCAHRLLE LLVAHGIETV FGIPGVHTVE LYRGLPDSGL RHVTPRHEQG AGFMADGYAR
ATGKPAACFI ISGPGMTNIA TAMGQALADS VPMLVISSVN RRDTLGRGQG RLHELPDQQH
TLSGVSVFSH TLQTPEALPE VLGRAFAVFK SARPGPVHIE IPLDVMALPA PETRPRIAEV
FPPTAPDAAL AWAADWLADA ERPLVLLGGG CVAAGDAVRT LVERLDAPAM TTINAKGVLG
CDHPLDLGAC ASLPAGRELA RHADVVLALG TELGETDYDL TFDGGFRLDG RLIRVDIDAQ
QLARNHATDL ALLADVGEVA LGLLERLPHQ ASREGAARVA DTRAALALRD ADDVAPYADF
LDTLREALPD ATIVGDSTGP VYAGNFIAEM PAPRRWFNAA TGYGTLGYGL PAALGAALGV
PERPVIALVG DGGLMFTLAE IATAREAGVP LAIVIWNNAG YGEIRRYMDA QDVPRLGVDL
AAPDFVTLAR SMDCHGVRVS TRTALHQALQ ASRQAPGPTL IDVEADRWSA
|
|---|
| |