Gene Csal_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0517 
Symbol 
ID4026987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp573375 
End bp574124 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content68% 
IMG OID637965681 
Product1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 
Protein accessionYP_572578 
Protein GI92112650 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 
TIGRFAM ID[TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTGA TTCCCGCCAT CGATCTCAAG GACGGCCAGT GCGTCCGCCT CAAGCAGGGG 
CGTATGGACG ACTCGACCAC CTACGGCGAC GACCCGGTGG CCATGGCGGC GCGCTGGGTC
GAGACCGGTG CCCGCCGCCT GCATCTGGTG GACCTCAACG GCGCCTTCGA AGGCAAGCCG
GTGAACGCCG AGGCGGTAAC CGCCATCGCC CGCGCGTACC CCGACTTGCC GATCCAGATC
GGGGGCGGCA TTCGCACCGC CGAGACCATC GAGGCATATC TCGAAGCGGG GGTTTCCTAT
GTGATCATCG GCACGCAGGC CGTCAAGGAG CCGGCATTCG TCGGCGAGAT GTGCCGGCGC
TTTCCGGGCC ACGTGATCGT CGGGCTCGAT GCCCGCGACG GCTATGTCGC CACCGATGGC
TGGGCGGAGG TCTCGACGCT CAAGGCCGTG GACCTGGCCA AGCGTTTCGC CGACGACGGC
GTCTCGTCGA TCGTGTACAC GGATATCGCC CGCGACGGCA TGATGCAGGG CGTCAACATC
GCCGCGACCG CCGAGCTGGC CCGCGAAGGC GGCCTGCCGG TCATCGCCTC GGGTGGCGTC
ACCCATCTGG GCGATATCGA AGCCCTGCTC GAGGTCGCGG ATGCCGGTAT CCTCGGCGCC
ATCACCGGCC GGGCCATCTA TGAAGGCAAG CTCGACGTCG CCGAGGCCCA GCGCCTGTGC
GACGCCCAAC TGGCAACCCG GAGGAGCTGA
 
Protein sequence
MLVIPAIDLK DGQCVRLKQG RMDDSTTYGD DPVAMAARWV ETGARRLHLV DLNGAFEGKP 
VNAEAVTAIA RAYPDLPIQI GGGIRTAETI EAYLEAGVSY VIIGTQAVKE PAFVGEMCRR
FPGHVIVGLD ARDGYVATDG WAEVSTLKAV DLAKRFADDG VSSIVYTDIA RDGMMQGVNI
AATAELAREG GLPVIASGGV THLGDIEALL EVADAGILGA ITGRAIYEGK LDVAEAQRLC
DAQLATRRS