Gene Csal_0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0496 
Symbol 
ID4026866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp544103 
End bp544909 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID637965655 
Productcompetence lipoprotein ComL, putative 
Protein accessionYP_572557 
Protein GI92112629 
COG category[R] General function prediction only 
COG ID[COG4105] DNA uptake lipoprotein 
TIGRFAM ID[TIGR03302] outer membrane assembly lipoprotein YfiO 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.4475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACTCC CTTCACTTGG CACGTTCGGT GCGTTGCTAC TGAGCGGCGC GCTGCTCGCC 
GGTTGCGCCA GCAACGAGCC GGCACCGGAC CTGCAAGAGC AGGAGCTCTA CCAGCAAGCG
CAATCGGCGC TCGATGCCGG GCGGTACAGC ACGGCCGTGA CACGCCTCGA AGCGCTGGAC
ACACGCTACC CCTTCGGACG CTACGCCGAG CAGGCTCAAC TGGAGCTGAT CTACGCGTAT
TACCAGACCG AAGACTGGGA ACAGGCACGC GCCGCCGCCA GCCGTTTCAT CCGCTTGCAT
CCCGACCACG CCCAGGTCGA CTACGCTTAC TACATGCGCG GGCTCGCGGC CTATCAAGCC
GGCCGTTTCA GTCTCGAAGG GCTCGAGCTG ATCGACATCT CCAAGCGCGA TCTGGGCGCC
ACGCGCGACG CCAACGTCGA CTTCGGCGAG CTGGTCCGCC GTTTTCCGGA CAGCCCTTAT
GCGGCCGACG CCCGCCAGCG CATCGTCTAC CTGCGCAACG TCCTCTCGCG TCACGAGCTG
CAGGTCGCCG ACTTCTACCT GCGCAAGGGC GCCTACCTGG CGGCCATCAA CCGTGGCGAG
TGGGTACTCC AGCACTATCC GCAGACCCCT GCCACGCGCG ATGCCCTCGC CGTCATGGTC
GAAGGCTACC TGGGGCTGGA CATGCGTGAT CGCGCGCGTA CCGTCCTGCA GACGCTGATC
AAGAACGATC CCGACAATGC ACGTCTCGAT GGCAACACCT TCGAGCCCGA GCACGTCGAC
GCCGAACCAT TGACGCTGAA CGACTGA
 
Protein sequence
MRLPSLGTFG ALLLSGALLA GCASNEPAPD LQEQELYQQA QSALDAGRYS TAVTRLEALD 
TRYPFGRYAE QAQLELIYAY YQTEDWEQAR AAASRFIRLH PDHAQVDYAY YMRGLAAYQA
GRFSLEGLEL IDISKRDLGA TRDANVDFGE LVRRFPDSPY AADARQRIVY LRNVLSRHEL
QVADFYLRKG AYLAAINRGE WVLQHYPQTP ATRDALAVMV EGYLGLDMRD RARTVLQTLI
KNDPDNARLD GNTFEPEHVD AEPLTLND