Gene Csal_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0493 
Symbol 
ID4026863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp540680 
End bp541075 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content55% 
IMG OID637965652 
Productmethylation 
Protein accessionYP_572554 
Protein GI92112626 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCGAA CCCGCGGTTT TACCCTGATC GAGCTGATGA TCGTCATGGT CATCATCGGC 
ATCCTGGCGG CGATCGCCAT TCCCGCGTAC ACCGAGCATG TGCGCAAGGC GCAGCGGGCC
GATGCCCAGG CCACGCTGAT GCAGCTGGCG TACTGGATGG AGCGTCAGTA CACGCAAAAC
AGTATTTACG ATACCGATGC CACATTGCCG GAGTCGATGA CAGGCGCAAA AGACCCTGAG
AGGGTGTACA AATTCGAGTC CCTACCTAAT CCCGATAAAA ATAAGGGGGA CGGGTTTCTG
CTGAAGGCCA CACGTATCAA TAGCCAAAGC GGGGATCAAT GTGGCGTGCT GAAGTTGTAC
GATACCGGGC AAAAACAGCC AGAAAAATGC TGGTGA
 
Protein sequence
MRRTRGFTLI ELMIVMVIIG ILAAIAIPAY TEHVRKAQRA DAQATLMQLA YWMERQYTQN 
SIYDTDATLP ESMTGAKDPE RVYKFESLPN PDKNKGDGFL LKATRINSQS GDQCGVLKLY
DTGQKQPEKC W