Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0489 |
Symbol | |
ID | 4026859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 538248 |
End bp | 538775 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637965648 |
Product | methylation |
Protein accession | YP_572550 |
Protein GI | 92112622 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4970] Tfp pilus assembly protein FimT |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGGCA TGCAACGTGG CATGACATTA CTCGAACTGC TCGTGCTCAT CGTCATCCTT GGCTTGCTGG CCACCCAGGG CATGCCCGCG ATGGGGCAAC TGCTACGCGA GCAGCGCCTG CAGGCTGCCA GCCACGCGCT CTACCAGACC CTGTATTACA CCCGTAGCGA AGCCATTCGT CAGGGCGTGC CGGTCATGCT GGTGAGTGAG GAAAACGGAT GGGAGCAAGG CTGGCGCGTG TTCGCCGATC GCGACGACGA TGGTCGACAA GGGCCCTCGG AGCCGACCTT GCGTGCCGGC GGCGGGCTCG CGAACGGGCT GCGGCTACGC GCCAATCAGC CCTTGCGACG CTACGTGCGC TACGCGCCAA ACGGTTATTC GCTGCGCGCT TCGGGCAGCT TCCAGATCGG CAGTTTCTAC CTGTGCACGG CGACGGCCAC GACACCCGCG CGCCGCATCG TGTTGAGCCG TGGCGGACGC GTACGCATTG AACGACTCCC GGAAGGCGAT GCCGCCTGTG CGCGCTGA
|
Protein sequence | MNGMQRGMTL LELLVLIVIL GLLATQGMPA MGQLLREQRL QAASHALYQT LYYTRSEAIR QGVPVMLVSE ENGWEQGWRV FADRDDDGRQ GPSEPTLRAG GGLANGLRLR ANQPLRRYVR YAPNGYSLRA SGSFQIGSFY LCTATATTPA RRIVLSRGGR VRIERLPEGD AACAR
|
| |