Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0441 |
Symbol | secY |
ID | 4027015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 488520 |
End bp | 489851 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637965599 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_572502 |
Protein GI | 92112574 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAGT CAGGAAACAT GCCGGCCAGT GGAAGTGGTC TGAGTGAACT TTGGGCGCGT CTGCGTTTCG TGTTCATCGC CATCGTGGTG TACCGCATCG GTGCCCATAT CCCGGTGCCT GGCATCAATC CTGACCAGCT CGCTGCCTTG TTCAGGGAAA ATCAGGGCAC CATCCTGGGC ATGTTCAACA TGTTCTCGGG TGGTGCGCTG TCGCGCATGA GTATTTTCGC GCTGGGGATC ATGCCTTACA TCTCCGCGTC GATCATCATG CAGCTCCTGA CGGCGGTCTC GCCTCAGCTG GAACAGCTGA AGAAGGAAGG TGAGGCTGGC CGGCGCAAGA TCAACCAGTA TACGCGCTAC GGCACGGTGG TGCTGGCATT GATCCAGGCG ACCGGCATGG CAGTCGGTCT GGTCGGACAG GGTGTCGCCT ATAGTGGCGA TCTCAGCTTC TACTTCACCG CAATCGTGAC GTTCGTCGCG GGTGCCGTGT TCCTCATGTG GCTGGGCGAG CAGATCACCG AGAAGGGGAT TGGCAACGGC ATTTCCCTTA TTATCTTCGC GGGTATCGTC GCAGGCCTGC CCAGCGCCAT CGGCCAGTCG TTTACACTGG CGCGCAACGA TGGGGCCTGG AATATCCTGC CGCTGCTGGC GTTGGCAGTG CTTGGGATCG CTACCGTGGC CTTCGTGGTC TTCATCGAGC GCGGTCAGCG TCGCATCACG GTGAACTATC CGCGTCGTCA GGTAGGCAAC AAGATGTATG CCGGGCAGAG CAGCTATCTG CCGCTGAAGG TGAACATGGC CGGCGTCATT CCGCCGATCT TCGCTTCCAG CATTCTGCTG TTCCCCGCGT CCATTGGCCA ATGGGTCGGT GAAGGCCAGA ACATGGCCTG GTTGCAGACG GTTTCCCAGG CGATGGGGCC GGGTCAGCCG TTGTACATCT TGCTTTTCGC CGCGGCGGTG CTATTCTTCT GCTTCTTTTA CACGGCGTTG GTCTTCAACC CCAAGGATGT GGCCGACAAC CTCAAGAAGT CAGGTGCATT CCTGCCGGGT ATTCGCCCGG GCGAGCAGAC GGCCCGCTAT GTCGATAAGG TCATGACGCG TCTGACGCTT TTCGGCGCCT TGTACATCAC TGCAGTCTCC CTGATGCCTC AGTTCCTCGT GGTGGCATGG CAAGTGCCCT TCTATTTCGG CGGCACTTCA TTGCTCATCG TCGTGGTGGT GGTCATGGAC TTCATGGCCC AGGTGCAGTC GCACCTGATG TCCAATCAGT ATGAGTCGGT GATGAAAAAG TCCAACCTGA AAGGCTATGG CAGCGGCGGC ATCCTGCGCT AA
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Protein sequence | MAKSGNMPAS GSGLSELWAR LRFVFIAIVV YRIGAHIPVP GINPDQLAAL FRENQGTILG MFNMFSGGAL SRMSIFALGI MPYISASIIM QLLTAVSPQL EQLKKEGEAG RRKINQYTRY GTVVLALIQA TGMAVGLVGQ GVAYSGDLSF YFTAIVTFVA GAVFLMWLGE QITEKGIGNG ISLIIFAGIV AGLPSAIGQS FTLARNDGAW NILPLLALAV LGIATVAFVV FIERGQRRIT VNYPRRQVGN KMYAGQSSYL PLKVNMAGVI PPIFASSILL FPASIGQWVG EGQNMAWLQT VSQAMGPGQP LYILLFAAAV LFFCFFYTAL VFNPKDVADN LKKSGAFLPG IRPGEQTARY VDKVMTRLTL FGALYITAVS LMPQFLVVAW QVPFYFGGTS LLIVVVVVMD FMAQVQSHLM SNQYESVMKK SNLKGYGSGG ILR
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