Gene Csal_0441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0441 
SymbolsecY 
ID4027015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp488520 
End bp489851 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content59% 
IMG OID637965599 
Productpreprotein translocase subunit SecY 
Protein accessionYP_572502 
Protein GI92112574 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0201] Preprotein translocase subunit SecY 
TIGRFAM ID[TIGR00967] preprotein translocase, SecY subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAGT CAGGAAACAT GCCGGCCAGT GGAAGTGGTC TGAGTGAACT TTGGGCGCGT 
CTGCGTTTCG TGTTCATCGC CATCGTGGTG TACCGCATCG GTGCCCATAT CCCGGTGCCT
GGCATCAATC CTGACCAGCT CGCTGCCTTG TTCAGGGAAA ATCAGGGCAC CATCCTGGGC
ATGTTCAACA TGTTCTCGGG TGGTGCGCTG TCGCGCATGA GTATTTTCGC GCTGGGGATC
ATGCCTTACA TCTCCGCGTC GATCATCATG CAGCTCCTGA CGGCGGTCTC GCCTCAGCTG
GAACAGCTGA AGAAGGAAGG TGAGGCTGGC CGGCGCAAGA TCAACCAGTA TACGCGCTAC
GGCACGGTGG TGCTGGCATT GATCCAGGCG ACCGGCATGG CAGTCGGTCT GGTCGGACAG
GGTGTCGCCT ATAGTGGCGA TCTCAGCTTC TACTTCACCG CAATCGTGAC GTTCGTCGCG
GGTGCCGTGT TCCTCATGTG GCTGGGCGAG CAGATCACCG AGAAGGGGAT TGGCAACGGC
ATTTCCCTTA TTATCTTCGC GGGTATCGTC GCAGGCCTGC CCAGCGCCAT CGGCCAGTCG
TTTACACTGG CGCGCAACGA TGGGGCCTGG AATATCCTGC CGCTGCTGGC GTTGGCAGTG
CTTGGGATCG CTACCGTGGC CTTCGTGGTC TTCATCGAGC GCGGTCAGCG TCGCATCACG
GTGAACTATC CGCGTCGTCA GGTAGGCAAC AAGATGTATG CCGGGCAGAG CAGCTATCTG
CCGCTGAAGG TGAACATGGC CGGCGTCATT CCGCCGATCT TCGCTTCCAG CATTCTGCTG
TTCCCCGCGT CCATTGGCCA ATGGGTCGGT GAAGGCCAGA ACATGGCCTG GTTGCAGACG
GTTTCCCAGG CGATGGGGCC GGGTCAGCCG TTGTACATCT TGCTTTTCGC CGCGGCGGTG
CTATTCTTCT GCTTCTTTTA CACGGCGTTG GTCTTCAACC CCAAGGATGT GGCCGACAAC
CTCAAGAAGT CAGGTGCATT CCTGCCGGGT ATTCGCCCGG GCGAGCAGAC GGCCCGCTAT
GTCGATAAGG TCATGACGCG TCTGACGCTT TTCGGCGCCT TGTACATCAC TGCAGTCTCC
CTGATGCCTC AGTTCCTCGT GGTGGCATGG CAAGTGCCCT TCTATTTCGG CGGCACTTCA
TTGCTCATCG TCGTGGTGGT GGTCATGGAC TTCATGGCCC AGGTGCAGTC GCACCTGATG
TCCAATCAGT ATGAGTCGGT GATGAAAAAG TCCAACCTGA AAGGCTATGG CAGCGGCGGC
ATCCTGCGCT AA
 
Protein sequence
MAKSGNMPAS GSGLSELWAR LRFVFIAIVV YRIGAHIPVP GINPDQLAAL FRENQGTILG 
MFNMFSGGAL SRMSIFALGI MPYISASIIM QLLTAVSPQL EQLKKEGEAG RRKINQYTRY
GTVVLALIQA TGMAVGLVGQ GVAYSGDLSF YFTAIVTFVA GAVFLMWLGE QITEKGIGNG
ISLIIFAGIV AGLPSAIGQS FTLARNDGAW NILPLLALAV LGIATVAFVV FIERGQRRIT
VNYPRRQVGN KMYAGQSSYL PLKVNMAGVI PPIFASSILL FPASIGQWVG EGQNMAWLQT
VSQAMGPGQP LYILLFAAAV LFFCFFYTAL VFNPKDVADN LKKSGAFLPG IRPGEQTARY
VDKVMTRLTL FGALYITAVS LMPQFLVVAW QVPFYFGGTS LLIVVVVVMD FMAQVQSHLM
SNQYESVMKK SNLKGYGSGG ILR