Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0427 |
Symbol | rpsC |
ID | 4025891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 482849 |
End bp | 483547 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637965585 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_572488 |
Protein GI | 92112560 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.159032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCAGA AAGTAAATCC GACAGGTATT CGGCTAGGTA TCGTCAAGGA CCACCGCTCC GTCTGGTACG CTGAGCGTGG TGCTTATGCC GATAAGCTGA ATAATGACCT CGAAGTGCGT CGTTTCCTGG AGCAGCGTTT GAAGAACGCC TCCGTGAGCG ACATCACCAT CGAGCGTCCA GCCAATAACG CACGCATCAC CATTCACACT GCCCGTCCGG GCATCGTGAT TGGCAAGAAG GGCGAGGATG TCGATCGCCT GCGTCGCGAT GTCTCCGAGA TGATGGGCGT GCCGGTTCAC GTCAACATCG AAGAGGTGCG CAAGCCCGAG CTTGACGCAC AGCTCGTCGC GCAGAACGTC TGCGGCCAGC TCGAACGCCG CGTGATGTTC CGTCGTGCCA TGAAGCGCGC CGTACAGAAC GCCATGCGCC TGGGCGCTGG CGGCATCAAG ATCCAGCTGT CAGGGCGTCT TGGTGGTGCG GAAATCGCGC GTACCGAATG GTATCGCGAA GGTCGCGTGC CGCTGCATAC GCTGCGCGCC GACATCGATT ATGCCACTTA CGAAGCGCAT ACCACCTACG GCGTTATCGG CGTCAAAGTG TGGGTCTTCA AGGGTGAGAT CCTCGGCGGT ATCGAGGAAG TGCGTGCCAA GCAGAAGCAG GCTCAGGCAC CGGCGCCCAA GAAGAAAGGT TCCAGGTAA
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Protein sequence | MGQKVNPTGI RLGIVKDHRS VWYAERGAYA DKLNNDLEVR RFLEQRLKNA SVSDITIERP ANNARITIHT ARPGIVIGKK GEDVDRLRRD VSEMMGVPVH VNIEEVRKPE LDAQLVAQNV CGQLERRVMF RRAMKRAVQN AMRLGAGGIK IQLSGRLGGA EIARTEWYRE GRVPLHTLRA DIDYATYEAH TTYGVIGVKV WVFKGEILGG IEEVRAKQKQ AQAPAPKKKG SR
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