Gene Csal_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0427 
SymbolrpsC 
ID4025891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp482849 
End bp483547 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content59% 
IMG OID637965585 
Product30S ribosomal protein S3 
Protein accessionYP_572488 
Protein GI92112560 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.159032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCAGA AAGTAAATCC GACAGGTATT CGGCTAGGTA TCGTCAAGGA CCACCGCTCC 
GTCTGGTACG CTGAGCGTGG TGCTTATGCC GATAAGCTGA ATAATGACCT CGAAGTGCGT
CGTTTCCTGG AGCAGCGTTT GAAGAACGCC TCCGTGAGCG ACATCACCAT CGAGCGTCCA
GCCAATAACG CACGCATCAC CATTCACACT GCCCGTCCGG GCATCGTGAT TGGCAAGAAG
GGCGAGGATG TCGATCGCCT GCGTCGCGAT GTCTCCGAGA TGATGGGCGT GCCGGTTCAC
GTCAACATCG AAGAGGTGCG CAAGCCCGAG CTTGACGCAC AGCTCGTCGC GCAGAACGTC
TGCGGCCAGC TCGAACGCCG CGTGATGTTC CGTCGTGCCA TGAAGCGCGC CGTACAGAAC
GCCATGCGCC TGGGCGCTGG CGGCATCAAG ATCCAGCTGT CAGGGCGTCT TGGTGGTGCG
GAAATCGCGC GTACCGAATG GTATCGCGAA GGTCGCGTGC CGCTGCATAC GCTGCGCGCC
GACATCGATT ATGCCACTTA CGAAGCGCAT ACCACCTACG GCGTTATCGG CGTCAAAGTG
TGGGTCTTCA AGGGTGAGAT CCTCGGCGGT ATCGAGGAAG TGCGTGCCAA GCAGAAGCAG
GCTCAGGCAC CGGCGCCCAA GAAGAAAGGT TCCAGGTAA
 
Protein sequence
MGQKVNPTGI RLGIVKDHRS VWYAERGAYA DKLNNDLEVR RFLEQRLKNA SVSDITIERP 
ANNARITIHT ARPGIVIGKK GEDVDRLRRD VSEMMGVPVH VNIEEVRKPE LDAQLVAQNV
CGQLERRVMF RRAMKRAVQN AMRLGAGGIK IQLSGRLGGA EIARTEWYRE GRVPLHTLRA
DIDYATYEAH TTYGVIGVKV WVFKGEILGG IEEVRAKQKQ AQAPAPKKKG SR